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ML-MD

A collection of jupyter notebooks using GNN models for MD simulation and cheminformatic tasks.

Trajectory prediction comparison torch baseline model vs e3NN equivariant network

Screenshot 2023-02-25 at 7 18 00 PM

pytorch baseline model

Screenshot 2023-02-25 at 7 13 34 PM

e3NN model

Screenshot 2023-02-22 at 7 41 55 PM

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Prediction of trajectories, forces and potential energy of small molecules using ML

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