Fix cleanGit for submodules of submodules #413
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Repos that have submodules with submodules will have a `.git` file that references the relative location of the submodules dir in the `.git/modules`. Without this file the contents of submodules of submodules are excluded from the `cleanGit` output.
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Repos that have submodules with submodules will have a
.gitfilethat references the relative location of the submodules dir in the
.git/modules. Without this file the contents of submodules ofsubmodules are excluded from the
cleanGitoutput.