Epidemiology

Setting Up

• When in the root directory inside your terminal, change directory to the subfolder src/model using cd
• Setup a virtual environment to install dependencies. Run the following commands to setup a virtualenv and install dependencies

Windows

python -m venv venv
venv/Scripts/activate
pip install -r ./requirements.txt

• Execute python ./setup.py develop to install the package
• Execute pytest to check if everything is working ok.

Contribution guidelines

• Fork the project
• Make a new branch
• Make the changes in that particular branch
• Create a pull request Check out this link for commit message guidelines.

References

• http://homepage.cs.uiowa.edu/~sriram/4980/spring20/notes/slides.1.21.pdf
• http://homepage.cs.uiowa.edu/~sriram/4980/spring20/notes/Jan28-30.pdf
• http://www.bio.utexas.edu/research/meyers/_docs/publications/DimitrovINFORMS10.pdf