Python scripts that I use in my everyday work to analyze shotgun metagenomic sequencing data of environmental microbiomes. All scripts include information on author and the date of creation.
Method S1 is a script to find assembled contigs with multiple antibiotic resistance genes (ARGs).
Method S2 is a script to find assembled contigs that carry antibiotic resistance genes (ARGs) and are binned into metagenome assembled genomes (MAGs).