Skip to content

Calling on various electron density software to carry out calculations in order to validate a PDB model is valid.

Notifications You must be signed in to change notification settings

kryogenica/model_validation

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

9 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

model_validation

PYTHON & CSH Calling on various electron density software to carry out calculations in order to validate a PDB model. These codes are made for csh (e.g. ubuntun) and it also needs Python2.7 or above to run. It takes advantage of multiprocessing, so having mutliple cores on your machine will be advantageous. (At least 6 are required.) This code needs for Phenix to be installed as it calls its functions. https://www.phenix-online.org/documentation/index.html The code also needs for --- to be installed. Next feature to add is PDB mutations.

Please refer to the following link to see what this code is capable of: https://www.slideshare.net/slideshow/embed_code/key/2pgphBbnoJvezo

About

Calling on various electron density software to carry out calculations in order to validate a PDB model is valid.

Topics

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published