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1. CRBHits CRBHits Public

   [CRBHits](https://github.com/kullrich/CRBHits) is a reimplementation of the Conditional Reciprocal Best Hit algorithm [crb-blast](https://github.com/cboursnell/crb-blast) in R.

   HTML 2

2. MSA2dist MSA2dist Public

   MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis

   C++ 4

3. scTEI scTEI Public

   add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects

   HTML 2

4. oggmap oggmap Public

   oggmap is a python package to extract orthologous maps (short: orthomap or in other words the evolutionary age of a given orthologous group) from OrthoFinder/eggNOG results. Oggmap results (gene ag…

   Python 4

5. korthoR korthoR Public

   korthoR calculates pairwise kmer jaccard distance between all sequences of an AAStringSet

   HTML