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Minimap2-2.22 (r1101)
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@lh3 lh3 released this 07 Aug 15:32
· 119 commits to master since this release
v2.22
7358a1e

When choosing the best alignment, this release uses logarithm gap penalty and
query-specific mismatch penalty. It improves the sensitivity to long INDELs in
repetitive regions.

Other notable changes:

  • Bugfix: fixed an indirect memory leak that may waste a large amount of
    memory given highly repetitive reference such as a 16S RNA database (#749).
    All versions of minimap2 have this issue.

  • New feature: added --cap-kalloc to reduce the peak memory. This option is
    not enabled by default but may become the default in future releases.

Known issue:

  • Minimap2 may take a long time to map a read (#771). So far it is not clear
    if this happens to v2.18 and earlier versions.

(2.22: 7 August 2021, r1101)

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