- Short link to access this repository: https://tinyurl.com/malvika-algorithm
Introduction & Background
Sequence Alignment
- Sequence alignment algorithms are ways to arrange two or many biological sequences
- They identify regions of similarity that may indicate to functional, structural, or evolutionary relationships between the sequences.
Sequence Alignment Algorithm
A variety of computational algorithms have been applied to the sequence alignment problem. These include slow but formally correct methods like dynamic programming. These also include efficient, heuristic algorithms or probabilistic methods designed for large-scale database search, that do not guarantee to find best matches. (Source: Wikipedia Sequence Alignment)
About this repository
The This repo consist of a demo file and related coduments to explain protein sequence, alignment algoriths to work with them and their relevance in bioinformatics.
Demo file
- Jupyter Notebook
- Access them on NBviewer and Binder: https://gke.mybinder.org/v2/gh/malvikasharan/Alignment-Algorithms/master.
Related files
License
These documents are freely available under MIT License.