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ENH: add inner loop functions for indexed loops and use them in ufunc_at #89

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wants to merge 12 commits into from
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ENH: add inner loop functions for indexed loops and use them in ufunc_at #89

wants to merge 12 commits into from

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mattip
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@mattip mattip commented Jan 31, 2023

  • Create inner loop functions where the second argument is an index to use for the first argument
  • Add a slot for these loops to ArrayMethodObject
  • Add code to parse a new kwarg "indexed" to the Ufunc class in numpy/core/code_generators/generate_umath.py which will generate C code to add the loops. It uses get_info_no_cast to find the correct ArrayMethodObject in the ufunc._loop info list.
  • thread a new try_trivial_at_loop into the logic of ufunc_at to call the new loops.

The good news is that ufunc_at can be up to 6.5x faster (via the benchmark added in numpy#22889). The bad news is that other benchmarks got slower. I am not sure why. Maybe the added field made the ufunc too big?

Benchmarks vs. main 
       before           after         ratio
     [c662a712]       [eb21b250]
     <main>           <indexed-loopos>
+      68.0±0.4μs          126±7μs     1.85  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '<')
+      66.6±0.6μs        117±0.5μs     1.75  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '<=')
+       134±0.5μs        234±0.7μs     1.75  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '<=')
+        67.8±1μs        118±0.5μs     1.74  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '<=')
+      66.7±0.7μs          111±1μs     1.66  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '>')
+      33.5±0.4μs         54.1±1μs     1.61  bench_strings.StringComparisons.time_compare_identical(10000, 'U', False, '<')
+       133±0.7μs          215±7μs     1.61  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '>')
+      34.1±0.2μs         54.6±1μs     1.60  bench_strings.StringComparisons.time_compare_identical(10000, 'U', False, '>')
+         131±3μs        210±0.8μs     1.60  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '<')
+      66.2±0.3μs        106±0.1μs     1.59  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '<')
+      68.2±0.6μs          108±3μs     1.59  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '>')
+     1.18±0.01μs       1.71±0.1μs     1.45  bench_strings.StringComparisons.time_compare_identical(100, 'U', True, '<')
+         532±4μs         720±10μs     1.35  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'rad2deg'>, 1, 1, 'e')
+         532±2μs         716±50μs     1.35  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'ceil'>, 4, 2, 'e')
+        1.96±0ms       2.64±0.6ms     1.35  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp'>, 2, 4, 'f')
+     4.58±0.03μs      6.16±0.01μs     1.34  bench_function_base.Sort.time_sort('merge', 'int32', ('ordered',))
+        26.1±2μs       35.0±0.8μs     1.34  bench_function_base.Sort.time_sort('merge', 'int32', ('sorted_block', 1000))
+         516±1μs         689±50μs     1.34  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'degrees'>, 4, 4, 'e')
+     4.57±0.02μs      6.10±0.03μs     1.33  bench_function_base.Sort.time_sort('merge', 'int32', ('uniform',))
+         531±5μs         699±60μs     1.32  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'fabs'>, 4, 4, 'e')
+         680±2ns         891±20ns     1.31  bench_itemselection.PutMask.time_sparse(True, 'int64')
+     1.21±0.01μs      1.58±0.03μs     1.31  bench_strings.StringComparisons.time_compare_identical(100, 'U', True, '>')
+         530±2μs         692±40μs     1.31  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'ceil'>, 1, 4, 'e')
+        663±20ns          867±2ns     1.31  bench_itemselection.PutMask.time_sparse(True, 'float64')
+         530±2μs         690±10μs     1.30  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'degrees'>, 4, 1, 'e')
+         531±3μs         685±90μs     1.29  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'ceil'>, 2, 2, 'e')
+         678±5ns          873±3ns     1.29  bench_itemselection.PutMask.time_sparse(True, 'complex64')
+       551±0.5μs         708±10μs     1.28  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'floor'>, 1, 1, 'e')
+         527±9μs         670±50μs     1.27  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'fabs'>, 1, 2, 'e')
+         535±4μs         674±60μs     1.26  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'degrees'>, 1, 4, 'e')
+         537±4μs         670±10μs     1.25  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'ceil'>, 4, 1, 'e')
+         554±4μs         682±30μs     1.23  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'floor'>, 4, 4, 'e')
+        856±20ns         1.04±0μs     1.22  bench_strings.StringComparisons.time_compare_identical(100, 'U', False, '<')
+         918±8ns         1.12±0μs     1.22  bench_itemselection.PutMask.time_dense(False, 'float16')
+         872±5ns      1.06±0.03μs     1.22  bench_strings.StringComparisons.time_compare_identical(100, 'U', False, '>')
+         660±1μs         800±20μs     1.21  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 4, 1, 'e')
+         660±2μs         800±40μs     1.21  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 2, 2, 'e')
+        91.6±2μs        111±0.1μs     1.21  bench_function_base.Sort.time_argsort('merge', 'uint32', ('sorted_block', 10))
+         661±3μs         798±10μs     1.21  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 1, 2, 'e')
+        52.7±5μs       63.4±0.9μs     1.20  bench_function_base.Sort.time_sort('merge', 'int32', ('sorted_block', 100))
+      76.5±0.2μs       92.0±0.6μs     1.20  bench_core.UnpackBits.time_unpackbits_axis1
+         917±3ns         1.10±0μs     1.20  bench_itemselection.PutMask.time_dense(False, 'int16')
+      39.4±0.7μs       47.3±0.1μs     1.20  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 2, 1, 'e')
+         666±5μs         798±10μs     1.20  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 1, 4, 'e')
+      28.5±0.2μs         34.1±2μs     1.19  bench_strings.StringComparisons.time_compare_identical(10000, 'S', True, '<')
+         660±1μs         788±30μs     1.19  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 4, 2, 'e')
+         662±3μs         788±30μs     1.19  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 4, 4, 'e')
+      40.3±0.1μs      47.6±0.07μs     1.18  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 4, 1, 'e')
+     4.41±0.01μs      5.21±0.05μs     1.18  bench_core.UnpackBits.time_unpackbits
+     10.7±0.07μs       12.6±0.3μs     1.18  bench_function_base.Sort.time_argsort('merge', 'float32', ('reversed',))
+        650±10μs         764±50μs     1.18  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 1, 1, 'e')
+     40.3±0.04μs       47.2±0.2μs     1.17  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 1, 2, 'e')
+     3.04±0.02μs      3.55±0.01μs     1.17  bench_itemselection.PutMask.time_dense(True, 'complex256')
+      39.5±0.5μs       46.0±0.7μs     1.17  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 1, 1, 'e')
+        2.62±0ms      3.03±0.06ms     1.16  bench_lib.Pad.time_pad((256, 128, 1), 8, 'linear_ramp')
+      41.3±0.2μs       47.7±0.2μs     1.15  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 4, 4, 'e')
+         660±4μs         762±40μs     1.15  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'log2'>, 2, 4, 'e')
+      40.6±0.2μs         46.6±1μs     1.15  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 4, 2, 'e')
+      40.6±0.3μs       46.4±0.9μs     1.14  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 2, 2, 'e')
+        50.1±1μs       57.2±0.2μs     1.14  bench_function_base.Sort.time_argsort('quick', 'int32', ('ordered',))
+      41.2±0.6μs       46.9±0.7μs     1.14  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 1, 4, 'e')
+        73.7±2μs       83.3±0.1μs     1.13  bench_reduce.AddReduceSeparate.time_reduce(0, 'float32')
+      41.5±0.3μs       46.8±0.7μs     1.13  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'positive'>, 2, 4, 'e')
+         797±6ns          896±9ns     1.12  bench_itemselection.PutMask.time_sparse(False, 'int16')
+      32.2±0.4μs       36.2±0.9μs     1.12  bench_strings.StringComparisons.time_compare_different((1000, 20), 'S', False, '<')
+        82.7±2μs         92.8±2μs     1.12  bench_function_base.Sort.time_sort('merge', 'int32', ('sorted_block', 10))
+         208±4μs          233±2μs     1.12  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 1, 1, 'f')
+       210±0.5μs          235±4μs     1.12  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 2, 4, 'f')
+         263±9μs          293±5μs     1.12  bench_function_base.Sort.time_sort('quick', 'int32', ('sorted_block', 100))
+     4.50±0.09μs       5.02±0.1μs     1.11  bench_indexing.ScalarIndexing.time_assign(0)
+       210±0.4μs        234±0.8μs     1.11  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 4, 1, 'f')
+         110±3μs          122±2μs     1.11  bench_function_base.Sort.time_argsort('merge', 'float32', ('sorted_block', 10))
+         214±2μs          237±2μs     1.11  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 4, 4, 'f')
+         210±2μs          233±3μs     1.11  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 2, 1, 'f')
+       212±0.5μs          235±1μs     1.11  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'exp2'>, 2, 2, 'f')
+         797±3ns          881±2ns     1.11  bench_itemselection.PutMask.time_dense(True, 'int64')
+      23.5±0.1μs       26.0±0.6μs     1.11  bench_function_base.Sort.time_argsort('heap', 'int32', ('uniform',))
+         795±6ns          877±3ns     1.10  bench_itemselection.PutMask.time_sparse(False, 'float16')
+      16.8±0.1μs      18.5±0.06μs     1.10  bench_ufunc.CustomInplace.time_float_add
+      56.4±0.4μs       62.1±0.6μs     1.10  bench_function_base.Sort.time_argsort('quick', 
-         285±1μs          257±1μs     0.90  bench_function_base.Sort.time_sort('quick', 'int16', ('sorted_block', 100))
-      48.2±0.3μs       43.5±0.3μs     0.90  bench_function_base.Sort.time_argsort('quick', 'int16', ('uniform',))
-       339±0.8μs          306±1μs     0.90  bench_function_base.Sort.time_sort('quick', 'int16', ('random',))
-     3.21±0.01μs      2.90±0.07μs     0.90  bench_itemselection.Take.time_contiguous((1000, 2), 'clip', 'longfloat')
-        706±40μs          637±3μs     0.90  bench_random.Random.time_rng('poisson 10')
-         388±6μs          350±3μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'logical_not'>, 1, 1, 'e')
-        76.5±1μs       69.0±0.7μs     0.90  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'S', True, '<=')
-     20.2±0.08μs      18.2±0.06μs     0.90  bench_strings.StringComparisons.time_compare_identical(10000, 'S', False, '<=')
-         512±2μs          462±9μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 4, 2, 'e')
-         517±2μs          466±9μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 2, 4, 'e')
-        31.7±1μs       28.6±0.3μs     0.90  bench_core.Core.time_array_float_l1000_dtype
-      9.44±0.6ms      8.49±0.07ms     0.90  bench_core.CorrConv.time_correlate(100000, 1000, 'full')
-      38.4±0.3μs       34.5±0.1μs     0.90  bench_strings.StringComparisons.time_compare_identical(10000, 'S', True, '<=')
-         511±4μs          460±8μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 1, 4, 'e')
-        38.3±1μs       34.5±0.3μs     0.90  bench_strings.StringComparisons.time_compare_identical(10000, 'S', True, '>=')
-      9.33±0.6ms      8.39±0.05ms     0.90  bench_core.CorrConv.time_correlate(100000, 1000, 'valid')
-     1.35±0.01μs      1.22±0.03μs     0.90  bench_itemselection.Take.time_contiguous((1000, 1), 'clip', 'float64')
-         510±3μs         458±10μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 2, 2, 'e')
-      57.2±0.2μs       51.4±0.2μs     0.90  bench_function_base.Sort.time_sort('quick', 'float64', ('ordered',))
-     1.35±0.01μs      1.21±0.01μs     0.90  bench_itemselection.Take.time_contiguous((1000, 2), 'clip', 'float32')
-         511±3μs          458±8μs     0.90  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 1, 1, 'e')
-         445±2μs        400±0.8μs     0.90  bench_function_base.Sort.time_sort('heap', 'float64', ('ordered',))
-        416±20ns          373±2ns     0.90  bench_scalar.ScalarMath.time_abs('float32')
-      3.42±0.2μs      3.07±0.02μs     0.90  bench_itemselection.Take.time_contiguous((1000, 1), 'wrap', 'complex256')
-      69.2±0.7μs       62.0±0.7μs     0.90  bench_strings.StringComparisons.time_compare_different((1000, 20), 'S', True, '<=')
-         370±6μs          331±8μs     0.90  bench_linalg.Eindot.time_einsum_i_ij_j
-        889±20ns          795±8ns     0.90  bench_itemselection.PutMask.time_sparse(False, 'float64')
-         371±3μs          332±2μs     0.90  bench_function_base.Sort.time_sort('merge', 'uint32', ('random',))
-         514±4μs          459±9μs     0.89  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'square'>, 4, 4, 'e')
-      18.5±0.1μs       16.5±0.2μs     0.89  bench_strings.StringComparisons.time_compare_different(10000, 'S', False, '<=')
-     1.13±0.01μs         1.01±0μs     0.89  bench_itemselection.Take.time_contiguous((1000, 1), 'wrap', 'float32')
-         905±1ns         808±10ns     0.89  bench_itemselection.PutMask.time_sparse(False, 'int64')
-      4.73±0.4ms      4.22±0.04ms     0.89  bench_ufunc.UFunc.time_ufunc_types('exp')
-      5.90±0.2μs      5.25±0.02μs     0.89  bench_linalg.Linalg.time_op('norm', 'int32')
-        99.4±2μs       88.3±0.4μs     0.89  bench_function_base.Bincount.time_bincount
-       186±0.8μs        165±0.7μs     0.89  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 2, 4, 'e')
-     2.10±0.04μs         1.86±0μs     0.89  bench_itemselection.Take.time_contiguous((2, 1000, 1), 'clip', 'float64')
-       198±0.3ms        176±0.4ms     0.89  bench_function_base.Histogram2D.time_fine_binning
-     1.97±0.01μs      1.74±0.01μs     0.89  bench_core.CountNonzero.time_count_nonzero(3, 100, <class 'str'>)
-       111±0.4μs       97.9±0.3μs     0.89  bench_function_base.Sort.time_sort('merge', 'float64', ('sorted_block', 10))
-         183±3μs          162±3μs     0.88  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 4, 4, 'e')
-        606±20μs          536±3μs     0.88  bench_core.CountNonzero.time_count_nonzero_axis(2, 1000000, <class 'numpy.int16'>)
-       395±0.6μs          349±2μs     0.88  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'logical_not'>, 4, 1, 'e')
-        528±20ns          467±9ns     0.88  bench_scalar.ScalarMath.time_addition('float16')
-      24.5±0.9μs       21.6±0.3μs     0.88  bench_function_base.Sort.time_sort('merge', 'uint32', ('sorted_block', 1000))
-      54.1±0.1μs       47.7±0.4μs     0.88  bench_core.CountNonzero.time_count_nonzero(1, 10000, <class 'str'>)
-     1.37±0.02μs      1.21±0.03μs     0.88  bench_itemselection.Take.time_contiguous((1000, 1), 'clip', 'int64')
-     1.59±0.01μs      1.40±0.01μs     0.88  bench_itemselection.Take.time_contiguous((2, 1000, 1), 'wrap', 'int32')
-     1.37±0.02μs      1.20±0.01μs     0.88  bench_itemselection.Take.time_contiguous((1000, 2), 'clip', 'int32')
-      46.8±0.7μs       41.1±0.7μs     0.88  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 2, 4, 'e')
-       186±0.8μs        163±0.5μs     0.88  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 2, 2, 'e')
-     45.3±0.09μs       39.7±0.6μs     0.88  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 2, 1, 'e')
-       186±0.8μs          163±1μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 4, 2, 'e')
-         904±3ns          791±4ns     0.87  bench_itemselection.PutMask.time_dense(True, 'int16')
-         904±3ns          790±9ns     0.87  bench_itemselection.PutMask.time_sparse(False, 'int32')
-       108±0.7μs       93.9±0.5μs     0.87  bench_core.CountNonzero.time_count_nonzero(2, 10000, <class 'str'>)
-       185±0.9μs          161±3μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 1, 4, 'e')
-        1.01±0ms         875±40μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'rint'>, 1, 4, 'e')
-     2.15±0.02μs      1.86±0.01μs     0.87  bench_itemselection.Take.time_contiguous((2, 1000, 1), 'clip', 'int64')
-        620±20μs         539±30μs     0.87  bench_reduce.AddReduceSeparate.time_reduce(0, 'complex128')
-     1.60±0.01μs      1.39±0.01μs     0.87  bench_itemselection.Take.time_contiguous((2, 1000, 1), 'wrap', 'float32')
-        46.8±1μs       40.6±0.7μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 4, 4, 'e')
-         186±1μs          161±3μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 4, 1, 'e')
-     2.14±0.01μs      1.85±0.01μs     0.87  bench_itemselection.Take.time_contiguous((2, 1000, 1), 'clip', 'complex64')
-         185±1μs          160±3μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 1, 1, 'e')
-       385±0.9μs          333±1μs     0.87  bench_function_base.Sort.time_sort('merge', 'int64', ('random',))
-      91.2±0.3μs       78.9±0.6μs     0.87  bench_ufunc_strides.AVX_ldexp.time_ufunc('e', 2)
-      47.2±0.1μs       40.8±0.5μs     0.87  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 1, 4, 'e')
-     1.15±0.01ms          993±6μs     0.87  bench_lib.Nan.time_nanvar(200000, 90.0)
-       185±0.3μs          160±2μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 2, 1, 'e')
-      47.4±0.3μs       40.9±0.2μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 4, 2, 'e')
-         896±3ns          773±4ns     0.86  bench_itemselection.PutMask.time_sparse(False, 'float32')
-     47.0±0.07μs       40.6±0.6μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 1, 4, 'e')
-      47.1±0.1μs       40.6±0.1μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 2, 2, 'e')
-       185±0.3μs          159±3μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sign'>, 1, 2, 'e')
-      34.6±0.6μs      29.7±0.08μs     0.86  bench_function_base.Sort.time_argsort('heap', 'float32', ('uniform',))
-         103±3μs         88.7±2μs     0.86  bench_function_base.Sort.time_sort('quick', 'float32', ('reversed',))
-      47.8±0.2μs       41.1±0.9μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 4, 4, 'e')
-         901±5ns          774±5ns     0.86  bench_itemselection.PutMask.time_dense(True, 'float16')
-       104±0.3μs         89.0±3μs     0.86  bench_function_base.Sort.time_sort('quick', 'float64', ('reversed',))
-      46.7±0.4μs       40.0±0.9μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 2, 2, 'e')
-      47.7±0.2μs       40.9±0.4μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 2, 4, 'e')
-      47.1±0.2μs       40.3±0.5μs     0.86  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 1, 2, 'e')
-       106±0.4μs         91.2±1μs     0.86  bench_function_base.Sort.time_argsort('quick', 'float64', ('reversed',))
-       100.0±1μs       85.5±0.1μs     0.86  bench_function_base.Sort.time_argsort('quick', 'int64', ('reversed',))
-      47.2±0.2μs       40.3±0.6μs     0.85  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 1, 2, 'e')
-     1.16±0.01ms          987±3μs     0.85  bench_lib.Nan.time_nanstd(200000, 90.0)
-        1.02±0ms         862±10μs     0.85  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'rint'>, 1, 2, 'e')
-         907±5ns          770±4ns     0.85  bench_itemselection.PutMask.time_sparse(False, 'complex64')
-      47.4±0.3μs       40.2±0.4μs     0.85  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 4, 2, 'e')
-      47.1±0.1μs       39.8±0.5μs     0.85  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 2, 1, 'e')
-      47.4±0.5μs       39.9±0.5μs     0.84  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 4, 1, 'e')
-      59.3±0.2μs       49.9±0.1μs     0.84  bench_function_base.Sort.time_argsort('quick', 'int16', ('ordered',))
-     26.8±0.08μs       22.5±0.2μs     0.84  bench_function_base.Sort.time_argsort('heap', 'uint32', ('uniform',))
-      47.0±0.2μs         39.5±1μs     0.84  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 1, 1, 'e')
-     1.33±0.01ms      1.12±0.03ms     0.84  bench_linalg.Einsum.time_einsum_noncon_outer(<class 'numpy.float32'>)
-      47.2±0.1μs         39.7±1μs     0.84  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (0), 4, 1, 'e')
-     63.4±0.08μs       53.3±0.1μs     0.84  bench_function_base.Sort.time_argsort('quick', 'float64', ('ordered',))
-      47.0±0.3μs       39.4±0.6μs     0.84  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'conjugate'> (1), 1, 1, 'e')
-     18.5±0.03μs       15.5±0.2μs     0.84  bench_ufunc.CustomInplace.time_double_add
-     8.24±0.03μs       6.90±0.2μs     0.84  bench_function_base.Sort.time_argsort('merge', 'uint32', ('uniform',))
-         116±2μs       96.4±0.3μs     0.83  bench_function_base.Sort.time_argsort('merge', 'int32', ('sorted_block', 10))
-         761±3μs         634±80μs     0.83  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sqrt'>, 1, 1, 'e')
-      47.4±0.1μs       39.4±0.2μs     0.83  bench_function_base.Sort.time_sort('quick', 'int64', ('uniform',))
-         595±9μs          494±3μs     0.83  bench_lib.Nan.time_nanvar(200000, 2.0)
-       101±0.3μs       83.7±0.8μs     0.83  bench_function_base.Sort.time_argsort('merge', 'int64', ('sorted_block', 10))
-         758±1μs         626±80μs     0.83  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sqrt'>, 4, 1, 'e')
-        13.7±1μs       11.2±0.3μs     0.82  bench_function_base.Where.time_2_broadcast
-         609±2μs          498±6μs     0.82  bench_lib.Nan.time_nanstd(200000, 2.0)
-     1.05±0.02μs          856±9ns     0.81  bench_core.CountNonzero.time_count_nonzero(1, 10000, <class 'numpy.int16'>)
-     8.27±0.01μs      6.72±0.02μs     0.81  bench_function_base.Sort.time_argsort('merge', 'uint32', ('ordered',))
-      37.1±0.4μs       30.1±0.2μs     0.81  bench_function_base.Sort.time_argsort('merge', 'int64', ('sorted_block', 1000))
-     1.16±0.01μs         933±20ns     0.81  bench_itemselection.PutMask.time_dense(False, 'int64')
-         489±3μs          393±5μs     0.80  bench_lib.Nan.time_nanstd(200000, 0.1)
-      94.7±0.9μs       76.1±0.3μs     0.80  bench_function_base.Sort.time_sort('merge', 'int64', ('sorted_block', 10))
-      13.3±0.1μs      10.7±0.06μs     0.80  bench_function_base.Where.time_2
-         783±4μs         627±80μs     0.80  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'radians'>, 4, 1, 'e')
-         468±4μs          373±2μs     0.80  bench_lib.Nan.time_nanvar(200000, 0)
-         481±1μs          380±7μs     0.79  bench_lib.Nan.time_nanstd(200000, 0)
-        1.15±0μs          906±6ns     0.79  bench_itemselection.PutMask.time_dense(False, 'complex64')
-        69.6±4μs         54.9±1μs     0.79  bench_function_base.Sort.time_argsort('merge', 'int64', ('sorted_block', 100))
-     8.76±0.04μs       6.89±0.2μs     0.79  bench_function_base.Sort.time_sort('merge', 'uint32', ('reversed',))
-        1.16±0μs          912±4ns     0.79  bench_itemselection.PutMask.time_dense(False, 'float64')
-      94.9±0.6μs         74.3±1μs     0.78  bench_function_base.Sort.time_sort('quick', 'int16', ('reversed',))
-      11.9±0.2μs       9.31±0.2μs     0.78  bench_function_base.Sort.time_sort('merge', 'float64', ('reversed',))
-         488±1μs          380±3μs     0.78  bench_lib.Nan.time_nanvar(200000, 0.1)
-      9.64±0.2μs       7.50±0.1μs     0.78  bench_function_base.Sort.time_sort('merge', 'int64', ('reversed',))
-     1.11±0.01μs         865±10ns     0.78  bench_strings.StringComparisons.time_compare_identical(100, 'U', False, '!=')
-     9.43±0.09μs      7.26±0.03μs     0.77  bench_linalg.Linalg.time_op('norm', 'int64')
-        1.64±0μs         1.25±0μs     0.76  bench_core.CountNonzero.time_count_nonzero(2, 10000, <class 'numpy.int16'>)
-        1.11±0μs          841±2ns     0.76  bench_strings.StringComparisons.time_compare_identical(100, 'U', False, '==')
-        53.9±5μs       40.8±0.8μs     0.76  bench_function_base.Sort.time_sort('quick', 'uint32', ('ordered',))
-         120±1μs         89.9±2μs     0.75  bench_linalg.Einsum.time_einsum_mul(<class 'numpy.float32'>)
-         782±6μs         584±30μs     0.75  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'deg2rad'>, 4, 4, 'e')
-         901±2ns          668±9ns     0.74  bench_itemselection.PutMask.time_sparse(True, 'int16')
-     1.64±0.01μs      1.21±0.01μs     0.74  bench_strings.StringComparisons.time_compare_identical(100, 'U', True, '!=')
-     2.25±0.03μs      1.65±0.01μs     0.73  bench_core.CountNonzero.time_count_nonzero(3, 10000, <class 'numpy.int16'>)
-         902±7ns         659±10ns     0.73  bench_itemselection.PutMask.time_sparse(True, 'float16')
-      1.20±0.1μs         864±20ns     0.72  bench_strings.StringComparisons.time_compare_identical(100, 'U', False, '>=')
-     1.63±0.01μs         1.16±0μs     0.71  bench_strings.StringComparisons.time_compare_identical(100, 'U', True, '>=')
-     6.96±0.07μs      4.83±0.05μs     0.69  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'absolute'>, 1, 1, 'e')
-      58.6±0.2μs       40.1±0.3μs     0.68  bench_core.CountNonzero.time_count_nonzero(1, 1000000, <class 'numpy.int16'>)
-       175±0.4μs        119±0.9μs     0.68  bench_core.CountNonzero.time_count_nonzero(3, 1000000, <class 'numpy.int16'>)
-        751±10μs        511±100μs     0.68  bench_ufunc_strides.Unary.time_ufunc(<ufunc 'sqrt'>, 4, 2, 'e')
-        1.71±0μs         1.16±0μs     0.68  bench_strings.StringComparisons.time_compare_identical(100, 'U', True, '==')
-         135±1μs         91.1±2μs     0.67  bench_function_base.Mean.time_mean_axis(100000)
-       118±0.8μs       79.4±0.5μs     0.67  bench_core.CountNonzero.time_count_nonzero(2, 1000000, <class 'numpy.int16'>)
-       131±0.3μs       86.8±0.6μs     0.66  bench_function_base.Mean.time_mean(100000)
-      46.1±0.8μs      30.2±0.09μs     0.66  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 4, 2, 'e')
-       371±0.5μs          243±6μs     0.65  bench_core.PackBits.time_packbits_axis0(<class 'bool'>)
-      46.9±0.2μs       30.3±0.5μs     0.65  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 1, 4, 'e')
-        46.0±1μs       29.6±0.6μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 4, 1, 'e')
-      47.0±0.3μs       30.2±0.5μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 1, 2, 'e')
-        46.1±1μs       29.7±0.5μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 2, 2, 'e')
-      46.9±0.1μs      30.0±0.07μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 1, 1, 'e')
-      47.1±0.2μs       30.0±0.5μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 2, 4, 'e')
-      47.4±0.2μs       30.2±0.6μs     0.64  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 4, 4, 'e')
-      46.9±0.2μs       29.5±0.6μs     0.63  bench_ufunc_strides.Unary.time_ufunc(<ufunc '_ones_like'>, 2, 1, 'e')
-       111±0.2μs         66.7±1μs     0.60  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '!=')
-         108±2μs       65.0±0.1μs     0.60  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '>=')
-      55.6±0.1μs       32.9±0.2μs     0.59  bench_strings.StringComparisons.time_compare_identical(10000, 'U', False, '!=')
-         217±1μs        128±0.8μs     0.59  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '!=')
-       109±0.4μs      64.3±0.07μs     0.59  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '!=')
-        57.4±3μs       33.6±0.8μs     0.59  bench_strings.StringComparisons.time_compare_identical(10000, 'U', False, '>=')
-         113±6μs       64.2±0.4μs     0.57  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '>=')
-        227±10μs        127±0.3μs     0.56  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '>=')
-     3.41±0.01μs      1.90±0.02μs     0.56  bench_io.Copy.time_cont_assign('float32')
-      61.9±0.2μs       33.6±0.5μs     0.54  bench_strings.StringComparisons.time_compare_identical(10000, 'U', False, '==')
-         123±1μs       65.8±0.3μs     0.54  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', False, '==')
-       244±0.8μs          130±3μs     0.53  bench_strings.StringComparisons.time_compare_identical((1000, 20), 'U', True, '==')
-       123±0.4μs       64.1±0.2μs     0.52  bench_strings.StringComparisons.time_compare_identical(10000, 'U', True, '==')
-     8.93±0.04ms      1.17±0.01ms     0.13  bench_ufunc.At.time_sum_at

SOME BENCHMARKS HAVE CHANGED SIGNIFICANTLY.
PERFORMANCE DECREASED.

@mattip mattip mentioned this pull request Jan 31, 2023
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mattip commented Feb 6, 2023

Closing in favor of the PR opened on numpy/numpy

@mattip mattip closed this Feb 6, 2023
mattip pushed a commit that referenced this pull request Nov 15, 2023
@qunaibit
Pull request #89: [GR-40889] Type initialization fix and bug fixes
1186c79 
Merge in ~STEPAN.SINDELAR_ORACLE.COM/numpy-hpy from mq/GR-40889 to labs-hpy-port

* commit '23216016a53c3788a1f4b7284ca1fa030dd1587b':
  address comments
  address comments
  hacky bug fix (revert me)
  bug fix
  bug fixes and hpy abort clean up
  port PyArray_GenericReduceFunction to HPy
  bug fix
  use free instead of PyMem_Free
  clean up
  port PyArray_EnsureXXArray to HPy
  missing PyArray_PyXXXAbstractDType initializations
  HPyArray_MaskedStridedUnaryOp require hpy ctx
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