created Dockerfile

[MADscientist314]

I created a Docker file for launching a docker container using the bioconduction parent rstudio-server image and has mia and miaViz preinstalled via Bioconductor.

[FelixErnst]

@MADscientist314 Thanks for the PR!

However, this is out of scope for this repository. We don't want to push anything non-R related to Bioconductor, which would be the case with the dockerfile.

You can create your own repo, add a good documentation via README.md and maintain the dockerfile there. @antagomir or @microsud can migrate it to the microbiome namespace, if they would like to.

[MADscientist314]

Makes perfect sense. Thanks!

[antagomir]

Great, thanks!

We can transfer and maintain this as a separate repository under the microbiome organization if you like, and this would make a lot of sense i.m.o. Could be also documented in the online manual.

[antagomir]

Hi @MADscientist314 - we could add this in a separate repository under the microbiome organization. I could create one, and provide the necessary permissions; then we can see how to integrate this into the full workflows.

[MADscientist314]

@antagomir whatever is easiest for you I am happy to contribute!

[antagomir]

Excellent. I just created a repository microbiome/docker and gave you developer-level permissions to that one.

Could you add the container in that repository, and provide the relevant information in README.md - after this let us know, we can review the contents and discuss adjustments through the issues of that repository.

Would this work, @MADscientist314 ?

[antagomir]

I have now also cross-checked that @MADscientist314 has the necessary permissions to manage the docker repository. The invitation pending.

[antagomir]

Ok the discussion continues in the Docker repo.