devcontainer build error with pyrfr #1001
Description
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [94 lines of output]
[<setuptools.extension.Extension('pyrfr._regression') at 0x7d3e1314ae40>, <setuptools.extension.Extension('pyrfr._util') at 0x7d3e13020190>]
/opt/conda/envs/test/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: BSD License
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
Deprecated command line option: -modern. Ignored, this option is now always on.
Deprecated command line option: -py3. Ignored, this option is no longer supported.
./include/rfr/nodes/k_ary_node.hpp:253: Warning 401: Nothing known about base class 'k_ary_node_minimal< 2,rfr::splits::binary_split_one_feature_rss_loss< double,double,unsigned int,std::default_random_engine,128 >,double,double,unsigned int,std::default_random_engine >'. Ignored.
./include/rfr/nodes/k_ary_node.hpp:253: Warning 401: Maybe you forgot to instantiate 'k_ary_node_minimal< 2,rfr::splits::binary_split_one_feature_rss_loss< double,double,unsigned int,std::default_random_engine,128 >,double,double,unsigned int,std::default_random_engine >' using %template.
In file included from ./include/cereal/archives/json.hpp:56,
from ./include/rfr/forests/regression_forest.hpp:21,
from ./include/rfr/trees/k_ary_tree.hpp:26,
from pyrfr/regression_wrap.cpp:3415:
./include/cereal/external/rapidjson/document.h: In member function ‘rapidjson::GenericStringRef<CharType>& rapidjson::GenericStringRef<CharType>::operator=(const rapidjson::GenericStringRef<CharType>&)’:
./include/cereal/external/rapidjson/document.h:319:82: error: assignment of read-only member ‘rapidjson::GenericStringRef<CharType>::length’
319 | GenericStringRef& operator=(const GenericStringRef& rhs) { s = rhs.s; length = rhs.length; }
| ~~~~~~~^~~~~~~~~~~~
In file included from ./include/rfr/trees/k_ary_tree.hpp:22:
./include/rfr/nodes/k_ary_node.hpp: In instantiation of ‘void rfr::nodes::k_ary_node_minimal<k, split_type, num_t, response_t, index_t, rng_t>::print_info() const [with int k = 2; split_type = rfr::splits::binary_split_one_feature_rss_loss<double, double, unsigned int, std::linear_congruential_engine<long unsigned int, 16807, 0, 2147483647>, 128>; num_t = double; response_t = double; index_t = unsigned int; rng_t = std::linear_congruential_engine<long unsigned int, 16807, 0, 2147483647>]’:
./include/rfr/nodes/k_ary_node.hpp:307:20: required from ‘void rfr::nodes::k_ary_node_full<k, split_type, num_t, response_t, index_t, rng_t>::print_info() const [with int k = 2; split_type = rfr::splits::binary_split_one_feature_rss_loss<double, double, unsigned int, std::linear_congruential_engine<long unsigned int, 16807, 0, 2147483647>, 128>; num_t = double; response_t = double; index_t = unsigned int; rng_t = std::linear_congruential_engine<long unsigned int, 16807, 0, 2147483647>]’
307 | super::print_info();
| ~~~~~~~~~~~~~~~~~^~
pyrfr/regression_wrap.cpp:22471:183: required from here
22471 | ((rfr::nodes::k_ary_node_full< 2,rfr::splits::binary_split_one_feature_rss_loss< num_t,response_t,index_t,rng_t,128 >,num_t,response_t,index_t,rng_t > const *)arg1)->print_info();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
./include/rfr/nodes/k_ary_node.hpp:209:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
209 | for (auto i=0; i<data_indices.size(); i++)
| ~^~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h: In instantiation of ‘void rapidjson::GenericValue<Encoding, Allocator>::SetObjectRaw(Member*, rapidjson::SizeType, Allocator&) [with Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; Member = rapidjson::GenericMember<rapidjson::UTF8<>, rapidjson::MemoryPoolAllocator<> >; rapidjson::SizeType = unsigned int]’:
./include/cereal/external/rapidjson/document.h:2363:55: required from ‘bool rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::EndObject(rapidjson::SizeType) [with Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator; rapidjson::SizeType = unsigned int]’
2363 | stack_.template Top<ValueType>()->SetObjectRaw(members, memberCount, GetAllocator());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/reader.h:1736:40: required from ‘rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::IterativeParsingState rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::Transit(IterativeParsingState, Token, IterativeParsingState, InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
1736 | bool hr = handler.EndObject(c);
| ~~~~~~~~~~~~~~~~~^~~
./include/cereal/external/rapidjson/reader.h:1832:58: required from ‘rapidjson::ParseResult rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::IterativeParse(InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
1832 | IterativeParsingState d = Transit<parseFlags>(state, t, n, is, handler);
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/reader.h:487:46: required from ‘rapidjson::ParseResult rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::Parse(InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
487 | return IterativeParse<parseFlags>(is, handler);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:2159:57: required from ‘rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>& rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::ParseStream(InputStream&) [with unsigned int parseFlags = 272; SourceEncoding = rapidjson::UTF8<>; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator]’
2159 | parseResult_ = reader.template Parse<parseFlags>(is, *this);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:2185:70: required from ‘rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>& rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::ParseStream(InputStream&) [with InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator]’
2185 | return ParseStream<kParseDefaultFlags, Encoding, InputStream>(is);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
./include/cereal/archives/json.hpp:427:34: required from here
427 | itsDocument.ParseStream<>(itsReadStream);
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:1952:24: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘rapidjson::GenericValue<rapidjson::UTF8<> >::Member’ {aka ‘struct rapidjson::GenericMember<rapidjson::UTF8<>, rapidjson::MemoryPoolAllocator<> >’} with no trivial copy-assignment; use copy-assignment instead [-Wclass-memaccess]
1952 | std::memcpy(m, members, count * sizeof(Member));
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:71:8: note: ‘rapidjson::GenericValue<rapidjson::UTF8<> >::Member’ {aka ‘struct rapidjson::GenericMember<rapidjson::UTF8<>, rapidjson::MemoryPoolAllocator<> >’} declared here
71 | struct GenericMember {
| ^~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h: In instantiation of ‘void rapidjson::GenericValue<Encoding, Allocator>::SetArrayRaw(rapidjson::GenericValue<Encoding, Allocator>*, rapidjson::SizeType, Allocator&) [with Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; rapidjson::SizeType = unsigned int]’:
./include/cereal/external/rapidjson/document.h:2371:54: required from ‘bool rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::EndArray(rapidjson::SizeType) [with Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator; rapidjson::SizeType = unsigned int]’
2371 | stack_.template Top<ValueType>()->SetArrayRaw(elements, elementCount, GetAllocator());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/reader.h:1766:39: required from ‘rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::IterativeParsingState rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::Transit(IterativeParsingState, Token, IterativeParsingState, InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
1766 | bool hr = handler.EndArray(c);
| ~~~~~~~~~~~~~~~~^~~
./include/cereal/external/rapidjson/reader.h:1832:58: required from ‘rapidjson::ParseResult rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::IterativeParse(InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
1832 | IterativeParsingState d = Transit<parseFlags>(state, t, n, is, handler);
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/reader.h:487:46: required from ‘rapidjson::ParseResult rapidjson::GenericReader<SourceEncoding, TargetEncoding, StackAllocator>::Parse(InputStream&, Handler&) [with unsigned int parseFlags = 272; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Handler = rapidjson::GenericDocument<rapidjson::UTF8<> >; SourceEncoding = rapidjson::UTF8<>; TargetEncoding = rapidjson::UTF8<>; StackAllocator = rapidjson::CrtAllocator]’
487 | return IterativeParse<parseFlags>(is, handler);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:2159:57: required from ‘rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>& rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::ParseStream(InputStream&) [with unsigned int parseFlags = 272; SourceEncoding = rapidjson::UTF8<>; InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator]’
2159 | parseResult_ = reader.template Parse<parseFlags>(is, *this);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:2185:70: required from ‘rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>& rapidjson::GenericDocument<Encoding, Allocator, StackAllocator>::ParseStream(InputStream&) [with InputStream = rapidjson::BasicIStreamWrapper<std::basic_istream<char> >; Encoding = rapidjson::UTF8<>; Allocator = rapidjson::MemoryPoolAllocator<>; StackAllocator = rapidjson::CrtAllocator]’
2185 | return ParseStream<kParseDefaultFlags, Encoding, InputStream>(is);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
./include/cereal/archives/json.hpp:427:34: required from here
427 | itsDocument.ParseStream<>(itsReadStream);
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:1939:24: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘class rapidjson::GenericValue<rapidjson::UTF8<> >’ with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
1939 | std::memcpy(e, values, count * sizeof(GenericValue));
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./include/cereal/external/rapidjson/document.h:540:7: note: ‘class rapidjson::GenericValue<rapidjson::UTF8<> >’ declared here
540 | class GenericValue {
| ^~~~~~~~~~~~
error: command '/usr/bin/g++' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for pyrfr
Running setup.py clean for pyrfr
Failed to build pyrfr
error: failed-wheel-build-for-install
× Failed to build installable wheels for some pyproject.toml based projects
╰─> pyrfr