Bioinformatician at UW-Madison Carbone Cancer Center. Interested in gene regulation, genomics, and machine learning.
Highlights
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ChIPseq_pipeline
ChIPseq_pipeline PublicA general ChIP-seq pipeline to reproducibly process many samples at once.
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freddolino-lab/ShapeME
freddolino-lab/ShapeME PublicAlgorithm to discover structural motifs informative of expression patterns
HTML 1
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Strandedseq_pipeline
Strandedseq_pipeline PublicA reproducible pipeline for processing NGS data from stranded workflows including RNA-seq and NET-seq
Python 1
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UWMadisonMLM25
UWMadisonMLM25 PublicRepository for UW-Madison Machine Learning Marathon 2025
Jupyter Notebook 2
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