Update r-lib/actions action to v2 #14
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This PR contains the following updates:
v1->v2Release Notes
r-lib/actions (r-lib/actions)
v2Compare Source
Note that
v2is a sliding tag, and we introduce non-breaking changes to it.v2.10.1(2024-08-08)[setup-r-dependencies]now pinsquarto-dev/quarto-actions/setupversion to a constant sha, to be compatible with organizations where
this is a requirement (#901).
[setup-renv]now also caches R packages inrenv/library, used whenRENV_CONFIG_PAK_ENABLED: true(#900).[setup-manifest]: new action to set up an R project with a PositConnect
manifest.jsonfile (#880).v2.10.0(2024-08-02)[setup-r]: on R 3.6.x we now use the P3M snapshot from 2024-06-01 bydefault. This is because many newer CRAN packages do not work on R 3.6.x
any more. The default CRAN mirror is still added, so newer packages may
be used if they are required, but
setup-r-dependencies@v2will preferthe binary packages from P3M.
Note that this only happens if you opt in to use P3M with the
use-public-rspm: trueinput parameter. This is the default in allexample workflows.
If the
RSPMenvironment variable is already set, then it is usedunchanged, on all R versions. To avoid using a P3M snapshot on R 3.6.x,
set the
RSPM_PIN_3_6environment variable tofalse.[setup-r]now installs the x86_64 build of R on arm64 macOS, if thereis no arm64 build available for this R version (#883).
Example blogdown, bookdown, document, pr-commands and render-markdown
workflows now correctly have write permission to repository contents
(#874, @remlapmot).
[check-r-package]: you can now setupload-snapshotstoalways, toupload snapshots even after failures (#871).
[setup-r-dependencies]now always sets theR_LIBS_USERGitHubenvironment variable, so it can be used without
[setup-r]or withoutsetting it manually (#881).
The example workflows now use their file names as workflow names.
This is to make it easier to match worflow runs to workflow files.
Most of the the
check-*workflows useR-CMD-check.yaml, however,to anticipate the usethis package renaming them by default (#888).
[setup-renv]: you can now setbypass-cachetonever, to save thecache even if the workflow fails (#873, @jaradkohl-mfj).
[setup-pandoc]: installing nightly Pandoc works again now (#889).[setup-r-dependencies]now automatically installs Quarto if the repohas a qmd file, and it isn't installed. See the
install-quartoandquarto-versioninput parameters (#866).[setup-r]now avoids spurious warnings from Homebrew (#864).[setup-r-dependencies]now acceptspak-version: noneto skip pakinstallation. pak should be already installed on the system in this
case, otherwise the dependencies resolution and installation will fail.
You probably also need to set the
R_LIB_FOR_PAKenv var to the librarywhere it is installed.
v2.9.0(2024-05-09)The
test-coverage.yamlexample workflow now handles global Codecovtokens for test coverage uploads to codecov.io
(@ALanguillaume, @gaborcsardi, #823).
The
check-full.yamlexample does not test on R 3.6.x any more.All example workflows set the default permissions now to read-only.
We deleted the (long broken)
run-rchkaction.R-hub will have an
rchkcontainer and builder soon: https://github.com/r-hub/containers/issues/29.[setup-r-dependencies]: new option to save the R package cache for
unsuccessful workflow runs as well (@schloerke, #695).
New example workflows
bookdown-gh-pagesandblogdown-gh-pagestodeploy bookdown books and blogdown sites to GH Pages without commiting
them into the repository (#856).
v2.8.7(2024-04-05)[setup-r-dependencies]now has alockfile-create-libinput parameter, that ispassed to
pak::lockfile_create(lib = ...)(#814).v2.8.6(2024-03-30)[setup-r]now does not install qpdf on Windows, because it is part of all Rtoolsversions that we use. Also, it installs Ghostscript from a
.zipfile instead of achocopackage, becausechoco installcan sometimes freeze (#812).v2.8.5(2024-03-26)[setup-r]uses a different tag name to download system packages from onWindows. This is to https://github.com/r-lib/usethis/issues/19671967.
v2.8.4(2024-03-25)[setup-r]: Ghostscript and QPDF installation is now more robust on Windows.We download and install manually, instead of installing from the Chocolatey
repository (#812).
v2.8.3(2024-03-20)[setup-r]now sets theHOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=trueenvironment variable when installation associated tools on macOS. Without this
brewoften fails on outdated Homebrew installations (#810).
[setup-r-dependencies]now works on aarch64 Linux.v2.8.2(2024-03-18)[setup-r]now supports Rtools44, and installs Rtools44 for R 4.4.x (currently R-devel).[check-r-package]now supportsupload-results: neverto never uploadcheck results as artifacts. This is useful if you want to handle artifact uploads
yourself.
v2.8.1(2024-02-29)[setup-r-dependencies]: fix Pandoc auto-installation (#808).v2.8.0(2024-02-27)[setup-r]now allowsrtools-version: noneto skip installing Rtools (#767).[setup-pandoc]: The default version is 3.1.11 now.[setup-pandoc]can now install the latest pandoc version, or the pandoc nightly build.[setup-pandoc]now supports arm64 macOS and any amd64 or arm64 Linux distribution.[setup-r-dependencies]now installs pandoc if the R package depends on the rmarkdown package.[check-r-package]now has inputsartifact-nameandsnapshot-artifact-nameto specify artifact names explicitly (#800).build_argsparameter (#787).v2.7.2(2024-02-01)[check-r-package]now uses better artifact names. It includesmatrix.config.idfrom the job matrix in the artifact name. If that's not defined then the zero-based job index in the matrix is used. For non-matrix jobs, this is0.v2.7.1(2024-01-31)[check-r-package]now includes the runner architecture in the name of the test output artifact, to avoid a name clash betweenmacos-14and other macOS runners.v2.7.0(2024-01-31)[setup-r]now removes Homebrew R from the PATH on macOS. With thissetup-rworks on the new arm64macos-14platform.v2.6.5(2023-10-27)[setup-r]now tries to avoid*.r-project.orgURLs, to work around a DNS issue.[check-r-package]now only sets_R_CHECK_CRAN_INCOMING_=falseif it is not set already (@krlmlr, #764).[setup-renv]now has aworking-directoryparameter (@milanmlft, #770).test-coverage.yamlworkflow now works on Windows.v2.6.4(2023-07-14)[setup-r-dependencies]now works withoutsudoon Linux.[setup-renv]now only installs renv if not installed already, e.g. the installation of the correct renv versionis typically triggered from the
.Rprofile(#747).v2.6.3(2023-04-26)[setup-r]now installs gfortran 12.2 only for R 4.3.0 and newer, as it is not compatible with theR 4.1.x (and possibly other) R builds (#722).
v2.6.2(2023-04-24)[setup-r]sets itsinstalled-r-versionoutput correctly again, to the actual R version number.[setup-r]now installs gfortran 12.2 for R 4.0.0 and newer. This fixes fortran compilation forR 4.3.0 and newer.
v2.6.1(2023-04-21)[setup-r]observes thertools-versioninput parameter again (#720).GITHUB_TOKENto allow deployment (#719, @jennybc).
v2.6.0(2023-04-21)[setup-r]now does a better job resolving R version specifications.v2.5.0(2023-04-01)[setup-r]: better cache key for R-devel: now the graphics engine API id and t he internal R id are also includedin the cache key (#699, @schloerke).
[setup-r]: ther-versionparameter can now be set torenv, to read the R version to install from therenv.lockfile (#701, @iqis).[setup-r]: now installs Rtools43 for R 4.3.0 (current R-next) and later (#714).[setup-r-dependencies]: new input parameter:upgrade, whether to install the latest available packageversions. Defaults to
FALSE.[setup-tinytex]: handle tinytex 2023 change about windows directory (#712, @cderv).[setup-pandoc]: fix installation of Pandoc 3.1.2 (and possibly later) on macOS (#716, @IndrajeetPatil).document.yamlworkflow now also saves theDESCRIPTIONfile (#694, @dpprdan).v2.4.0(2023-01-16)[setup-r]: supports Rtools43 now. On R-devel Windows Rtools43 is installed by default (#682).[setup-renv]: new input parameter:bypass-cacheto skip the GitHub cache completely (#667, @davidski).style.yamlexample workflow now installs roxygen2 as well (#690, @dpprdan).document.yamlandstyle.yamlexample workflows now do not run for pull requests (#683, @arisp99).v2.3.1(2022-11-04)[setup-r-dependencies]is now compatible with renv again (#652).[check-r-package]now sets theLOGNAMEenvironment variable, which is needed for anR CMD checktest to work (#651).v2.3.0(2022-10-26)All node.js actions use node 16 now.
[check-r-package]uploading artifacts works now whenworking-directoryis set (#614, @riccardoporreca).[setup-pandoc]uses now pandoc version 2.19.2 by default.[setup-r]now setsRENV_CONFIG_REPOS_OVERRIDEto RSPM, if RSPM is requrested (#572).[setup-r]has a newwindows-path-include-rtoolsparameter (#574).[setup-r]now installs ghostscript on all platforms, as it is sometimes needed forR CMD check(#583).[setup-r-dependencies]now installs pak into the site library. This helps checking packages that depend on pak (#640).[setup-renv]has a newprofileparameter for the renv profile to use inrenv::activate()(#649, @Bisaloo).All example workflows use actions relying on node 16 now.
Example workflows using lintr now fail on lint errors now (#537).
The
check-fullworkflow now includes a check on Windows 4.1.x (#564).The
styleexample how also supports Quarto.qmdfiles (#629, @IndrajeetPatil).New example workflow,
lint-changed-files, to lint only the changed files (#567, @IndrajeetPatil).New example workflow,
check-no-suggests, to runR CMD checkwith only the suggested packages (#549).The
test-coverageworkflow now prints the test results and on test failures it also uploads them as an artifact (#643).v2.2.8(2022-08-31)ubuntu-latestinstead ofubuntu-20.04. This avoid having to update your workflows every two years.It does not change anything right now, however, as
ubuntu-latestis the same asubuntu-20.04currently.v2.2.7(2022-08-23)v2.2.6(2022-08-22)v2.2.5(2002-08-05)[check-r-package]now correctly uploads artifacts after a check error (#593, #595).shiny-deployexample now works correctly.v2.2.4(2022-07-27)[setup-r]does not fixreleaseto 4.2.0 any more.v2.2.3(2002-06-23)[setup-r]releaseis now fixed to R 4.2.0 on Linux, until we have the Linux binaries ready for R 4.2.1.check-diris specified (#560, @riccardoporreca)v2.2.2(2022-04-25)[setup-r]releaseis not fixed to R 4.1.3 any more, on Linux.v2.2.1(2022-04-21)[setup-r]releaseis now fixed to R 4.1.3 on Linux, until we have the Linux binaries and RSPM binary packagesready for R 4.2.0.
v2.2.0(2022-04-01)[setup-r]now supportsnextas an R version. It installs the next version of R. This is R-patched if there is noactive release process. Otherwise it can be R-alpha, R-beta, R-rc or R-prerelease (#542).
[setup-r-dependencies]has a newcacheinput parameter, which you can set tofalseto disable the cache(@Bisaloo, #530).
[setup-r-dependencies]now removed the temporary.github/pkg.lockfile after the package installation,to avoid a dirty git tree (@schloerke, #526).
[setup-pandoc]now fails if it fails to install pandoc (@nikeee, #515).v2.1.5(2022-03-11)[setup-r]: remove workaround for R 4.1.3.releaseis R 4.1.3 now on Linux.v2.1.4(2022-03-10)[check-r-package: newupload-resultsparameter to be able to upload the result artifact for successful checks.[setup-r]: fix R installation for Rrelease.v2.1.3(2022-02-18)[setup-r-dependencies]: thepak-versionparameter defaults to "stable" now.[setup-tinynex]now fails if it fails to download or install TinyTeX (#505).v2.1.2(2022-02-16)[setup-r]now again adds Rtools40 to the path (#504, @nealrichardson).[setup-r]Rtools42 version updated to latest.v2.1.1(2022-02-14)[setup-r-dependencies]uses the correct cache key now, previously it was truncated.v2.1.0(2022-02-12)[setup-r-dependencies]now has apackagesparameter, to override which package(s) to install (#486).[setup-r]now supports Rtools42. Pass'42'as thertools-versionparameter (#491).[setup-r]: thewindows-path-include-mingwparameter is now defunct with Rtools40 and later, as it is not needed and possibly causes confusion.[check-r-package]has a new parameter:upload-snapshots, to upload testthat snapshots as artifacts (#473).roxygen2::roxygenise()andstyler::style_pkg()on a repo and commit the results (#434).v2.0.11(2022-01-16)[setup-r]forces HTTP/1.1 for pak/pkgcache.[setup-r-dependencies]does the same. This seems to fix crashes during package installation (#483).v2.0.10(2022-01-11)clean: falseto allow a production and a dev site.v2.0.9(2022-01-11)[setup-r]now does not download qpdf on Windows, because it is alreadyincluded in Rtools (#474).
v2.0.8(2022-01-11)[check-r-package]does not print the environment now, because there is a slight chance that printingexposes processed secrets that GitHub's reduction mechanism misses.
v2.0.7(2022-01-06)v2.0.6(2022-01-05)[setup-r]does not add theppa:cran/travisPPA on Ubuntu, as it is not needed any more. (@jeroen, #465)[setup-r]macOS R-devel builds use a more robust R download URL now (@s-u, #466).[setup-r-dependencies]now uses the correct cache key ifworking-directoryis specified (@harupy, #471)v2.0.5(2021-12-17)[setup-r-dependencies]now works with older versions of the sessioninfo package.(This typically happens on older R versions and Windows or macOS, where pak prefers
to install an older binary package to a newer source package, unless the newer package
is needed.)
v2.0.4(2021-12-16)[setup-r]and[setup-r-dependencies]now have better organized output[check-r-package]now prints all environment variables before the check.v2.0.3(2021-12-15)[setup-r]and[setup-r-dependencies]do not treat R versiondevel-ucrtspecially any more,and it is equivalent to
devel.v2.0.2(2021-12-14)[check-r-package]now sets the_R_CHECK_FORCE_SUGGESTS_=falseenvironment variable,unless it was already set before to a non-empty value.
v2.0.1(2021-12-13)[setup-r-dependencies]is now better at ignoring soft package dependencies thatcannot be installed on the current R version. See more in the README here:
https://github.com/r-lib/actions/tree/v2/setup-r-dependencies#ignoring-optional-dependencies-that-need-a-newer-r-version
v2.0.0(2021-12-12)Breaking changes from
v1[check-r-package]: many parameters have a new format now, and they needto be legal R expressions.
[setup-r]does not have acrayon.enabledparameter now. You can update.Rprofilemanually to set options if you like, see example in the README.New compared to
v1[check-r-package]has aworking-direcytoryparameter now (#393).[check-r-package]prints the testthat output, and uploads artifacts on failurenow, no need to do these in the workflow file.
[run-rchk]is now a more flexible composite action (@randy3k, #380, #428).[setup-pandoc]now defaults to Pandoc version 2.14.2.[setup-r]more robust installation in macOS, hopefully the hangs are solved.[setup-r]now works on macOS Big Sur for older R versions (#412).[setup-r-dependencies]has more robust dependency and system dependency lookupand installation (#370, #386, #405, #419, #430, #431, #432, #437).
[setup-r-dependencies]automatically uses the UCRT versions of packages on UCRT R.[setup-r-dependencies]has aworking-directoryparameter now (#393, #438).[setup-r-dependencies]has a less conservative cache key now for R-devel (#429).[setup-r-dependencies]now has adependenciesparameter to finetune whichdependencies are installed (#409).
Changes in example workflows from
v1v2tag.trigger a build manually.
well, without deploying (#363).
on error, these are done in the
check-r-packageaction now.Configuration
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