PhyloWGS v1.0-rc1
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This is the first release candidate for PhyloWGS v1.0. This version is underlying our analysis of thousands of tumors as part of the Pan-Canacer Analysis of Whole Genomes project, in which it has been stable and robust.
If you're using a prior version of PhyloWGS, in addition to pulling the latest code from GitHub, please recompile mh.o via the command listed in the README:
g++ -o mh.o -O3 mh.cpp util.cpp `gsl-config --cflags --libs`