mrForce
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mip_epigraph
mip_epigraph PublicAn implementation of the algorithm described here. It uses Mixed Integer Programming for determining the optimal path through the epitope graph
Python 1
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GenericMSA
GenericMSA PublicThis is an implementation of Multiple Sequence Alignment, where the "sequences" are grouped; we insert the gaps into all of the sequences in a group. C and Python
C
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immunoGalaxy
immunoGalaxy PublicA Galaxy pipeline for MS/MS based immunopeptidomics. Uses MSGF+, NetMHC and Percolator.
Python
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