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  1. dwm_configuration dwm_configuration Public

    This is my DWM configuration

    C 4

  2. mip_epigraph mip_epigraph Public

    An implementation of the algorithm described here. It uses Mixed Integer Programming for determining the optimal path through the epitope graph

    Python 1

  3. GenericMSA GenericMSA Public

    This is an implementation of Multiple Sequence Alignment, where the "sequences" are grouped; we insert the gaps into all of the sequences in a group. C and Python

    C

  4. immunoGalaxy immunoGalaxy Public

    A Galaxy pipeline for MS/MS based immunopeptidomics. Uses MSGF+, NetMHC and Percolator.

    Python

  5. kmer_hashtable kmer_hashtable Public

    C