MamPhy_v1

Code base for Mammalia backbone-and-patch supermatrix project

Explore the mammal trees here.

References:

Upham NS, Esselstyn JA, Jetz W. 2019. Inferring the mammal tree: species-level sets of phylogenies for questions in ecology, evolution, and conservation. PLOS Biology https://doi.org/10.1371/journal.pbio.3000494

Data Dryad: https://doi.org/10.5061/dryad.tb03d03

Phylosubsetting tool: http://vertlife.org/phylosubsets (prune to taxa and download trees)

The enclosed code should enable all the analyses and figures in our PLOS Biology paper to be directly reproduced.