Skip to content

Issues: nf-core/airrflow

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 71 Closed
21 Open 71 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Double check that for all protocols, sequences with different Cprimers (isotypes) are not collapsed when collapsing duplicates bug Something isn't working
#356 opened Oct 23, 2024 by ggabernet
move contaminant sequence detection to before collapsing duplicates enhancement New feature or request
#355 opened Oct 23, 2024 by ggabernet
modify pRESTO collapseseq process to keep UMI annotations enhancement New feature or request
#354 opened Oct 23, 2024 by ggabernet
Enhancements for TCR analysis (locus TR) enhancement New feature or request
#353 opened Oct 19, 2024 by ggabernet
3 tasks
Add UMI barcode diversity reporting enhancement New feature or request
#352 opened Oct 19, 2024 by ggabernet
Filtering sequences belonging to the loci specified in the samplesheet only enhancement New feature or request
#351 opened Oct 19, 2024 by ggabernet
New bulk 5'-RACE supported protocol, rescue non-overlaping reads and IgBlast 19 columns format enhancement New feature or request
#342 opened Aug 5, 2024 by JustBioinfo
Incorrect number of sequences bug Something isn't working
#340 opened Jun 24, 2024 by eba28
Add the calculations of physicochemical properties from alakazam enhancement New feature or request
#326 opened Apr 22, 2024 by JustBioinfo
Fetch other databases than IMGT: AIRR reference set enhancement New feature or request
#300 opened Jan 22, 2024 by ggabernet
Add regions translations to final repertoire table enhancement New feature or request
#298 opened Jan 18, 2024 by ggabernet
Report findthreshold should report chosen threshold enhancement New feature or request
#272 opened Jul 3, 2023 by ggabernet 3.2
samplesheet check make character bug Something isn't working
#271 opened Jul 3, 2023 by ggabernet 3.2
Test data enhancement New feature or request
#253 opened Apr 21, 2023 by ggabernet 3.2
@ggabernet
Add remaining R scripts to EnchantR enhancement New feature or request
#246 opened Mar 14, 2023 by ggabernet
3 tasks
Add metada should add only metadata columns needed for the analyses enhancement New feature or request
#230 opened Feb 13, 2023 by ssnn-airr
Report primers in airrflow report enhancement New feature or request
#193 opened Oct 25, 2022 by ggabernet
Fetch databases separate from build igblast reference enhancement New feature or request
#131 opened Aug 12, 2021 by ggabernet 3.2
check version of downloaded databases enhancement New feature or request
#96 opened Mar 23, 2021 by ggabernet
1
include process to estimate error enhancement New feature or request
#64 opened Jan 25, 2020 by ggabernet
Include other define clones algorithms enhancement New feature or request
#28 opened Apr 8, 2019 by ggabernet
ProTip! Exclude everything labeled bug with -label:bug.