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R differential modules control over output prefixes #3664

Merged
merged 13 commits into from
Jul 25, 2023
Merged

R differential modules control over output prefixes #3664

merged 13 commits into from
Jul 25, 2023

Commits on Jul 23, 2023

  1. R differential modules control over output prefixes

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  2. Set differential module prefixes

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  3. Actually we need to do prefix handling within the template

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  4. Set differential module prefixes

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  5. Fix test files for new prefix specification

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  6. Add meta to limma test

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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  7. Fix DESeq2 tests

    @pinin4fjords
    pinin4fjords committed Jul 23, 2023
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Commits on Jul 24, 2023

  1. fix remaining tests for limma

    @pinin4fjords
    pinin4fjords committed Jul 24, 2023
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  2. Update grep to fix broken solve

    @pinin4fjords
    pinin4fjords committed Jul 24, 2023
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  3. Try bumping affy

    @pinin4fjords
    pinin4fjords committed Jul 24, 2023
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  4. Use new build

    @pinin4fjords
    pinin4fjords committed Jul 24, 2023
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  5. update md5sum for annotation

    @pinin4fjords
    pinin4fjords committed Jul 24, 2023
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  6. Merge branch 'master' into differential_module_prefixes

    Jonathan Manning authored Jul 24, 2023
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