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Fix linting fail on nfcore_external_java_deps if nf_schema is used #2976

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merged 6 commits into from
May 13, 2024

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itrujnara
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Fixed a bug where linting failed in pipelines using nf_schema instead of nf_validation.
Conditional file linting now accepts a list of parameters instead of a single one. The parameters are or-gated, i.e. a single one is sufficient to mark the parameter as present (and thus expect the file to not exist).
Please verify test coverage, as I am not familiar with the coding practices in tools.

PR checklist

  • This comment contains a description of changes (with reason)
  • CHANGELOG.md is updated
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated

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codecov bot commented May 10, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 75.19%. Comparing base (1ae28bc) to head (c3e2844).

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@mashehu mashehu left a comment

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very nice, thanks!

@mashehu
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mashehu commented May 10, 2024

@nf-core-bot changelog

@itrujnara itrujnara merged commit a157cb1 into nf-core:dev May 13, 2024
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3 participants