FIX: Check for valid qform before calculating change #466
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Hello @effigies, Thank you for updating! Cheers! There are no style issues detected in this Pull Request. 🍻 To test for issues locally, Comment last updated at 2020-02-26 17:35:11 UTC |
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Hard one to test. I don't know how to create a file that doesn't have a valid qform. I've asked the submitter to send me their header, and maybe we can do something there. |
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Now have full coverage of this interface. See https://codecov.io/gh/poldracklab/niworkflows/pull/466/src/niworkflows/interfaces/images.py?before=niworkflows/interfaces/images.py This is ready for a review. |
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Feb 27, 2020
20.0.1 (February 27, 2020) Bug-fix release in 20.0.x series. This release includes fixes for rare images with invalid qform matrices and some minor improvements in report readability and inclusion of common templates in the Docker image. * FIX: Handle qforms with invalid quaternions (nipreps/niworkflows#466) * FIX: update niworkflows location (#2005) * ENH: Display errors as summary/details elements in reports (nipreps/niworkflows#464) * DOC: Add ``--fs-subjects-dir`` usage to slurm example (#2003) * CI: Test that Docker image can run a common set of output spaces without network access (#1997)
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This is a follow-up to #365. We were running into the case where
valid_qformwasFalse, and thusqformwas an unbound variable, but trying to compare the new qform to the old qform.This bug was introduced in 92e63fe, first released in 0.10.3. As this was included in fMRIPrep as of nipreps/fmriprep@b6d1e51, this bug is expected to affect versions 1.5.0-20.0.0 of fMRIPrep.
Fixes #465.