Stable tests #923
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Stable tests | |
| # This file tests the claimed support range of nipype including | |
| # | |
| # * Operating systems: Linux, OSX | |
| # * Dependencies: minimum requirements, optional requirements | |
| # * Installation methods: setup.py, sdist, wheel, archive | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - maint/* | |
| tags: | |
| - "*" | |
| pull_request: | |
| branches: | |
| - master | |
| - maint/* | |
| schedule: | |
| # 8am EST / 9am EDT Mondays | |
| - cron: "0 13 * * 1" | |
| defaults: | |
| run: | |
| shell: bash | |
| concurrency: | |
| group: tests-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: {} | |
| jobs: | |
| build: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - run: pip install --upgrade build twine | |
| - name: Build sdist and wheel | |
| run: python -m build | |
| - run: twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| test-package: | |
| runs-on: ubuntu-latest | |
| needs: [build] | |
| strategy: | |
| matrix: | |
| package: ["wheel", "sdist"] | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Update pip | |
| run: pip install --upgrade pip | |
| - name: Install wheel | |
| run: pip install dist/nipype-*.whl | |
| if: matrix.package == 'wheel' | |
| - name: Install sdist | |
| run: pip install dist/nipype-*.tar.gz | |
| if: matrix.package == 'sdist' | |
| - run: python -c 'import nipype; print(nipype.__version__)' | |
| - name: Install test extras | |
| run: pip install nipype[tests] | |
| - name: Run tests | |
| run: pytest --doctest-modules -v --pyargs nipype | |
| stable: | |
| # Check each OS, all supported Python, minimum versions and latest releases | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-22.04"] | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| check: ["test"] | |
| pip-flags: [""] | |
| depends: ["REQUIREMENTS"] | |
| deb-depends: [false] | |
| nipype-extras: ["doc,tests,profiler"] | |
| include: | |
| - os: ubuntu-22.04 | |
| python-version: "3.8" | |
| check: test | |
| pip-flags: "" | |
| depends: REQUIREMENTS | |
| deb-depends: true | |
| nipype-extras: doc,tests,profiler,duecredit,ssh | |
| - os: ubuntu-20.04 | |
| python-version: 3.8 | |
| check: test | |
| pip-flags: "" | |
| depends: REQUIREMENTS | |
| deb-depends: true | |
| nipype-extras: doc,tests,nipy,profiler,duecredit,ssh | |
| env: | |
| DEPENDS: ${{ matrix.depends }} | |
| CHECK_TYPE: ${{ matrix.check }} | |
| EXTRA_PIP_FLAGS: ${{ matrix.pip-flags }} | |
| INSTALL_DEB_DEPENDENCIES: ${{ matrix.deb-depends }} | |
| NIPYPE_EXTRAS: ${{ matrix.nipype-extras }} | |
| INSTALL_TYPE: pip | |
| CI_SKIP_TEST: 1 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Create virtual environment | |
| run: tools/ci/create_venv.sh | |
| - name: Build archive | |
| run: | | |
| source tools/ci/build_archive.sh | |
| echo "ARCHIVE=$ARCHIVE" >> $GITHUB_ENV | |
| - name: Install Debian dependencies | |
| run: tools/ci/install_deb_dependencies.sh | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| - name: Install dependencies | |
| run: tools/ci/install_dependencies.sh | |
| - name: Install Nipype | |
| run: tools/ci/install.sh | |
| - name: Run tests | |
| run: tools/ci/check.sh | |
| if: ${{ matrix.check != 'skiptests' }} | |
| - uses: codecov/codecov-action@v4 | |
| with: | |
| file: coverage.xml | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| if: ${{ always() }} | |
| - name: Upload pytest test results | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: pytest-results-${{ matrix.os }}-${{ matrix.python-version }}-${{ matrix.deb-depends }} | |
| path: test-results.xml | |
| if: ${{ always() && matrix.check == 'test' }} | |
| publish: | |
| runs-on: ubuntu-latest | |
| environment: "Package deployment" | |
| needs: [stable, test-package] | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/') | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} |