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Cannot run Pydra Tutorial in Binder as markdown hasn't been compiled #674

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tclose opened this issue Jul 12, 2023 · 4 comments
Open

Cannot run Pydra Tutorial in Binder as markdown hasn't been compiled #674

tclose opened this issue Jul 12, 2023 · 4 comments
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@tclose
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tclose commented Jul 12, 2023

There doesn't seem to be way to launch the tutorial when using binder, as the tutorial pages haven't been compiled into *.ipynb files.

You could do this in an GH Action on push to master, but that would require writing a new commit to the repo I think...

@tclose tclose added the bug Something isn't working label Jul 12, 2023
@effigies
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How does binder find out what to install? If you add jupytext to the environment, it should work.

@satra
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satra commented Jul 12, 2023

@tclose - if you right click on the md file and open as notebook that should give you the notebook interface. it's possible given when these files were created that the metadata in the header may be off for opening automatically. jupytext is installed in that environment.

@effigies
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It seems that the config can be set in JupyterLab to open as a notebook by default: https://jupytext.readthedocs.io/en/latest/text-notebooks.html#with-a-single-click

I'm not sure how to get that config into binder by default, yet.

@effigies
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