Miscellaneous documentation updates #3256
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We update the `combined_multispecies.md` page to: * import some of the documentation from the old wiki; * better reflect the new composite pipeline. Also add a note in the `bridges.md` file about the addition of the OBO Foundry unique label annotations in the bridge files, alongside the bridging axioms proper.
The contents of `uberon_build_pipeline.md` is mostly oudated, now that 1) the ODK migration is over, and 2) the custom Makefile has been revamped.
If we take the time to mention the OWL API and OWLTools in the acknowledgements, it is only fair to also mention ROBOT, which is more and more taking the place of OWLTools. Consequently, I believe it is also only fair to mention James Overton, as the main ROBOT developer.
Update the `current_release.md` page to list all release artifacts and provide download links for each of them in all available formats.
Add a quick checklist to facilitate onboarding new curators in Uberon.
Remove trailing `:` characters in section titles, add commas between links to release artifacts.
matentzn
requested changes
Apr 16, 2024
Fix a bogus link, a typo, some missing words, and add a alt text to the image depicting the differences between collected and composite ontologies.
Make sure the "meta" mapping set, grouping all the mappings used by Uberon, is listed on the release page. The file is not *currently* available because we have yet to make a release since we have added the code to publish it, but it will be upon the next release.
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Apr 17, 2024
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This PR updates the Uberon documentation to: