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README.md

Java_SSBDapi

Java package to access Systems Science of Biological Dynamics (SSBD) database via its REST API http://ssbd.qbic.riken.jp

Copyright (C) 2016 RIKEN/JST

Original contributors: Kenneth H.L. Ho, Yukako Tohsato, Koji Kyoda, Shuichi Onami

Synopsis

  • NOTE: The current version is no longer compatible with the current SSBD version 3.0 REST API. A newer version of the Java API interface will be released shortly.

  • Java_SSBDapi repository contains a reference implementation of Java SSBD Class to access SSBD REST API

  • TestSSBD.java is an Java program which contains examples of using the Java SSBD Class to access SSBD for visualization and data analysis. The implementation tries to follow the Python SSBD API (see Py_SSBDapi ). The output of the file can be found here

  • SSBD.java is reference implemnetation of Java SSBD Class to access SSBD directly via SSBD REST API

Known issues

Contributors guide

  • Please feel free to fork, enhance/modify Java_SSBDapi. We look forward to hearing from you and together we hope to share new ideas and collaborate in new projects using Java_SSBDapi.
  • If you find any bugs, or questions, please submit and open an Issue.

Acknowledgment

This work has been partly supported by National Bioscience Database Center (NBDC) of Japan Science and Technology Agency (JST).

License

Copyright (C) 2016 RIKEN/JST

GNU GENERAL PUBLIC LICENSE Version 3 (GPLv3.0)

This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, version 3 of the License.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program.  If not, see <http://www.gnu.org/licenses/>

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Java package to access SSBD REST API

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