Repositories list

• geneie_nif_calculator

  Public
  GENEie NIF calculator

  HTML

  •

  Other

  •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

• rna-seq2

  Public
  RNASeq alignment pipeline

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• SpliceVault

  Public
  Transcript specific RNA splicing events lookup

  R

  •0•5•3•0•Updated Oct 15, 2024Oct 15, 2024

• SpliceAIAPI

  Public
  API wrapper around SpliceAPI

  Python

  •0•0•1•1•Updated Sep 10, 2024Sep 10, 2024

• SpliceAILookup

  Public archive
  Web frontend to inspect SpliceAI raw scores

  Vue

  •1•0•1•0•Updated Aug 20, 2024Aug 20, 2024

• hgvs

  Public
  HGVS variant name parsing and generation

  Gherkin

  •

  MIT License

  •79•0•2•0•Updated Jul 29, 2024Jul 29, 2024

• SpliceVault_figures

  Public
  R

  •0•2•0•0•Updated Mar 5, 2024Mar 5, 2024

• shinyapps-deploy-github-action

  Public
  R

  •

  MIT License

  •13•0•0•0•Updated Feb 15, 2024Feb 15, 2024

• kidsneuro-lab.github.io

  Public
  HTML

  •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

• RNA_splice_tool

  Public
  R

  •1•0•0•0•Updated Oct 27, 2023Oct 27, 2023

• genome_viewer_tracks

  Public
  0•0•0•0•Updated Jun 9, 2023Jun 9, 2023

• 300K-RNA

  Public
  1•2•1•0•Updated Nov 24, 2022Nov 24, 2022

• spliceai_es_scores

  Public
  Pre computed Splice AI scores for essential splice sites

  Jupyter Notebook

  •0•0•0•0•Updated Aug 31, 2022Aug 31, 2022

• cryptic_donor_prediction

  Public
  Empirical prediction of variant-activated cryptic splice donors using population-based RNA-Seq data

  R

  •0•1•0•0•Updated Jan 17, 2022Jan 17, 2022

• 40K-RNA

  Public
  Python

  •0•1•0•0•Updated Jan 14, 2022Jan 14, 2022

• SpliceAI

  Public
  A deep learning-based tool to identify splice variants

  Python

  •

  Other

  •159•0•0•0•Updated Nov 25, 2021Nov 25, 2021

• minimal_introns

  Public
  R

  •0•0•0•0•Updated Dec 18, 2018Dec 18, 2018