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@penn-cnt Center for Neuroengineering and Therapeutics

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    39 repositories

    • scalp_deep-learning

      Public
      Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • CNT-codehub

      Public
      Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • IEEG_Spike-Morphology

      Public
      Python
      •0•0•0•0•Updated Oct 26, 2024Oct 26, 2024

    • epilepsy_lateralization

      Public
      HTML
      •0•0•0•0•Updated Sep 11, 2024Sep 11, 2024

    • Pattnaik-sleep-atlas

      Public
      Code for normative atlases in sleep
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 9, 2024Sep 9, 2024

    • cnt_tle_laterality

      Public
      MATLAB
      •1•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • Sixth_Sense

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 28, 2024Jul 28, 2024

    • pennsieve-workflow_bid-validator

      Public
      A simple workflow for Pennsieve to validate bids datasets.
      Dockerfile
      •0•0•0•0•Updated Jul 17, 2024Jul 17, 2024

    • collaborator_repository

      Public
      Repository for sharing code with collaborators
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 3, 2024Apr 3, 2024

    • RNS_STIM-MORPHOLOGY

      Public
      Analyzing how the functional and structural connectome predict response to repeated therapeutic stimulation.
      MATLAB
      •1•0•0•0•Updated Mar 4, 2024Mar 4, 2024

    • LDA-subfield-atrophy

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 5, 2024Feb 5, 2024

    • CNT_Preprocessing_Toolkit

      Public
      Toolkit for pre-processing of intracranial EEG data, and an interactive pipeline for pre-processing method evaluation.
      Jupyter Notebook
      •1•0•0•0•Updated Jan 22, 2024Jan 22, 2024

    • ieeg-recon

      Public
      IEEG electrode reconstruction: modular pipeline in MATLAB and Python
      Python
      •2•6•2•0•Updated Jan 22, 2024Jan 22, 2024

    • multimodal_excitation_inhibition

      Public
      Normative modeling and multimodal correspondence of excitation-inhibition (E:I) ratio
      Python
      •0•0•0•0•Updated Jan 17, 2024Jan 17, 2024

    • fMRI_HUP2BIDS

      Public
      Python Heudiconv Wrapper for HUP fMRI to BIDS format conversion
      Python
      •0•0•0•0•Updated Nov 12, 2023Nov 12, 2023

    • R01_R61_Pipeline

      Public
      Python
      •0•1•0•0•Updated Oct 12, 2023Oct 12, 2023

    • CNT_research_tools

      Public template
      CNT-approved research tools
      MATLAB
      •1•1•1•0•Updated Oct 9, 2023Oct 9, 2023

    • CNT_EEG_TEMPLATE

      Public template
      EEG focused fork of the Penn CNT code repository.
      Python
      •1•0•0•0•Updated Oct 5, 2023Oct 5, 2023

    • DATA-ECO_BIDS-CONVERTER

      Public
      Bids conversion scripts for data collaborations
      Jupyter Notebook
      •0•0•0•0•Updated Aug 17, 2023Aug 17, 2023

    • NLP_Disparities_in_Seizure_Freedom

      Public
      Python
      •1•0•0•0•Updated Aug 15, 2023Aug 15, 2023

    • CNT_IMAGING_TEMPLATE

      Public template
      Python
      •0•0•0•0•Updated Aug 2, 2023Aug 2, 2023

    • generalization_of_nlp_in_clinical_contexts

      Public
      Python
      •0•0•0•0•Updated Jun 28, 2023Jun 28, 2023

    • CNT_Research_Template

      Public template
      Research template repository for the University of Pennsylvania CNT lab
      Python
      •1•0•0•0•Updated May 24, 2023May 24, 2023

    • Text_Mining_Epilepsy_Outcomes

      Public
      Python
      •0•0•0•0•Updated May 8, 2023May 8, 2023

    • TLE_Gradients

      Public
      Jupyter Notebook
      •0•1•0•1•Updated Apr 20, 2023Apr 20, 2023

    • RNS_processing_toolbox

      Public
      This repository contains code for processing and analyzing data from the responsive neurostimulation (RNS) device by NeuroPace.
      rnsanalyzing-data
      Python
      •7•3•10•1•Updated Apr 13, 2023Apr 13, 2023

    • BiTLE_Segregation

      Public
      Repository for analyses related to the manuscript: "Resting State Functional Connectivity Demonstrates Increased Segregation in Bilateral Temporal Lobe Epilepsy"
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 13, 2023Mar 13, 2023

    • IEEG_atlas_Sinha

      Public
      IEEG atlas code originally developed by Nishant Sinha
      MATLAB
      •0•0•0•0•Updated Nov 12, 2022Nov 12, 2022

    • Pattnaik-seizure-severity

      Public
      Code for "A quantitative tool for seizure severity: diagnostic and therapeutic applications"
      Python
      •
      MIT License
      •0•1•1•0•Updated Nov 4, 2022Nov 4, 2022

    • voxTool

      Public
      Python
      •
      MIT License
      •7•0•0•0•Updated Oct 28, 2022Oct 28, 2022