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Closes #2147 addressing cran failure #2149

Merged
merged 3 commits into from
Oct 4, 2023
Merged

Closes #2147 addressing cran failure #2149

merged 3 commits into from
Oct 4, 2023

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zdz2101
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@zdz2101 zdz2101 commented Oct 3, 2023

Thank you for your Pull Request! We have developed this task checklist from the Development Process Guide to help with the final steps of the process. Completing the below tasks helps to ensure our reviewers can maximize their time on your code as well as making sure the admiral codebase remains robust and consistent.

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github-actions bot commented Oct 3, 2023

Code Coverage

Package Line Rate Health
admiral 98%
Summary 98% (4419 / 4489)

regexp = paste(
paste(
"The input dataset does not contain any observations fullfiling the filter",
"condition (NULL) for the parameter codes (PARAMCD) `HEIGHT`"
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@zdz2101 zdz2101 Oct 3, 2023

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image

Background:

  • One of R version 4.4's biggest changes is that is.atomic(NULL) now returns FALSE, it currently returns TRUE.
  • In our codebase, for get_hori_data() which is used for derive_param_computed(), in the section that creates warning messaging, we use a function from rlang::expr_label() to assist us with the aesthetically pleasing looking warning messages.
  • expr_label() is currently under the lifecycle's "questioning" label which means rlang themselves had thoughts of: "a function is no longer certain that a function is the optimal approach, but doesn’t yet know how to do it better"
  • We would just need to add ticks around NULL to fix/make sure the test passes for 4.4 but it would break the tests for <=4.3
  • For the purpose of our code/test in this case its really no big deal, I suggest we just lighten up the restriction not to string match the entire warning message, and just the part that says: "The input dataset does not contain any observations fullfiling the filter" so that it would continue to work for all versions
  • The messaging of this warning in the future would now encase NULL in ticks vs prior to 4.4 it did not

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bms63 commented Oct 4, 2023

We will need to upversion the DESCRIPTION File and make a news blurb.

@zdz2101 zdz2101 requested a review from bms63 October 4, 2023 15:30
@zdz2101 zdz2101 linked an issue Oct 4, 2023 that may be closed by this pull request
@bms63 bms63 merged commit 9bcb396 into patch Oct 4, 2023
19 checks passed
@bms63 bms63 deleted the 2147_failed_cran_checks branch October 4, 2023 18:06
bms63 added a commit that referenced this pull request Oct 6, 2023
…hecks (#2157)

* Closes #2147 addressing cran failure (#2149)

* feat: #2147 one solution but proceed with caution

* description uplevel and news blurb

* pass links?

---------

Co-authored-by: Zelos Zhu <zdz2101@github.com>

* Update README.md (#2155)

* Update README.md

* URL update

---------

Co-authored-by: Daniel Sjoberg <danield.sjoberg@gmail.com>

---------

Co-authored-by: Zelos Zhu <zelos.zhu@atorusresearch.com>
Co-authored-by: Zelos Zhu <zdz2101@github.com>
Co-authored-by: Daniel Sjoberg <danield.sjoberg@gmail.com>
bms63 added a commit that referenced this pull request Oct 19, 2023
* Closes #2147 addressing cran failure (#2149)

* feat: #2147 one solution but proceed with caution

* description uplevel and news blurb

* pass links?

---------

Co-authored-by: Zelos Zhu <zdz2101@github.com>

* Update README.md (#2155)

* Update README.md

* URL update

---------

Co-authored-by: Daniel Sjoberg <danield.sjoberg@gmail.com>

* Closes #2154 fix_dthcaus: fix derive_var_dthcaus() (#2162)

* #2154 fix_dthcaus: fix derive_var_dthcaus()

* #2154 fix_dthcaus: run templates check

* #2154 fix_dthcaus: update version number and NEWS

* docs: fixing curlys after feedback from CRAN

* chore: styling death test

---------

Co-authored-by: Zelos Zhu <zelos.zhu@atorusresearch.com>
Co-authored-by: Zelos Zhu <zdz2101@github.com>
Co-authored-by: Daniel Sjoberg <danield.sjoberg@gmail.com>
Co-authored-by: Stefan Bundfuss <80953585+bundfussr@users.noreply.github.com>
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URGENT! Failed CRAN Checks: 2023-10-02
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