Python quit unexpectedly: segmentation fault on macOS 13.0.1 Ventura

[EugeneTorap]

Crash report

I did't have problems on macOS 12 Monterey but after updating to macos 13.0.1 on M1 the crash issue appears.
I've also created the issue on developer.apple.com and there's ability to download the full logs there.
What is added / changed in the macOS 13.0.1 Ventura that the Python is crashed?

Error messages

When I run any python command without debug in console I have the next Problem Report for Python:

• CPython versions tested on: 3.9.15 & 3.10.8
• Operating system and architecture: macOS 13.0.1 Ventura, arm64

@ronaldoussoren @terryjreedy

[AlexWaygood]

Please don't ping random CPython core developers in issue threads. Only ping a core developer on an issue if you know it's something they have a specific interest or expertise in :)

[EugeneTorap]

Okay :)

[AlexWaygood]

There's a list of expertise/interest areas here, for future reference: https://devguide.python.org/core-developers/experts/index.html#experts

[EugeneTorap]

Hi @ronaldoussoren @ned-deily Can you help me with this Problem Report for Python?
Is it easy to reproduce the crash on new macOS version?
Can this issue be fixed in the next 3.9.16 & 3.10.9 versions?

[ned-deily]

Unfortunately, the screen shot you posted is not of much help because the most important information in the crash report is further down in the listing. Without that information, it is impossible to give an informed opinion about the cause of the problem you are seeing. If you upload the full crash report (the macOS Console app can help find such crash report) to this issue or paste its contents here, we might be able to diagnose further. Also, it is not clear from the information you provide what command(s) you typed to cause the crash: I'm not exactly sure what "When I run any python command without debug in console" means.

For the record, Python 3.10.8 from both the python.org installers and from MacPorts launch just fine for me on an M1 Mac running 13.0.1. You appear to be trying to use a Python 3.10.8 from Homebrew; you should verify that all of your Homebrew packages are up-to-date and you could also check their issue tracker for similar reports. But for what it's worth, when segfaults like this occur, the cause is often in a third-party extension module that may be installed.

[ronaldoussoren]

Crash log from the issue mentioned in the developer forum message mentioned in the original message:

Crash Log

-------------------------------------
Translated Report (Full Report Below)
-------------------------------------

Process:               Python [4214]
Path:                  /opt/homebrew/*/Python.framework/Versions/3.10/Resources/Python.app/Contents/MacOS/Python
Identifier:            org.python.python
Version:               3.10.8 (3.10.8)
Code Type:             ARM-64 (Native)
Parent Process:        zsh [3939]
Responsible:           Terminal [3936]
User ID:               501

Date/Time:             2022-11-15 16:02:39.1019 +0300
OS Version:            macOS 13.0.1 (22A400)
Report Version:        12
Anonymous UUID:        A7DDD0BB-0E66-8B5A-9A3B-B5BAD27FE0CB


Time Awake Since Boot: 3500 seconds

System Integrity Protection: enabled

Crashed Thread:        0  Dispatch queue: com.apple.main-thread

Exception Type:        EXC_BAD_ACCESS (SIGSEGV)
Exception Codes:       KERN_INVALID_ADDRESS at 0x0000000000000010
Exception Codes:       0x0000000000000001, 0x0000000000000010

Termination Reason:    Namespace SIGNAL, Code 11 Segmentation fault: 11
Terminating Process:   exc handler [4214]

VM Region Info: 0x10 is not in any region.  Bytes before following region: 105553518919664
      REGION TYPE                    START - END         [ VSIZE] PRT/MAX SHRMOD  REGION DETAIL
      UNUSED SPACE AT START
--->  
      MALLOC_NANO (reserved)   600018000000-600020000000 [128.0M] rw-/rwx SM=NUL  ...(unallocated)

Thread 0 Crashed::  Dispatch queue: com.apple.main-thread
0   libarrow.600.dylib            	       0x12b81297c Aws::Http::CurlHandleContainer::~CurlHandleContainer() + 52
1   libarrow.600.dylib            	       0x12b812970 Aws::Http::CurlHandleContainer::~CurlHandleContainer() + 40
2   libarrow.600.dylib            	       0x12b80f800 Aws::Http::CurlHttpClient::~CurlHttpClient() + 128
3   libarrow.600.dylib            	       0x12b7e7d0c Aws::Internal::AWSHttpResourceClient::~AWSHttpResourceClient() + 160
4   libarrow.600.dylib            	       0x12a7baf78 arrow::Future::~Future() + 72
5   libsystem_c.dylib             	       0x1ac6b905c __cxa_finalize_ranges + 464
6   libsystem_c.dylib             	       0x1ac6b8df0 exit + 44
7   Python                        	       0x10513b050 Py_Exit + 36
8   Python                        	       0x10513f99c handle_system_exit + 44
9   Python                        	       0x10513deb4 _PyErr_PrintEx + 56
10  Python                        	       0x10513e930 _PyRun_SimpleFileObject + 524
11  Python                        	       0x10513de74 _PyRun_AnyFileObject + 232
12  Python                        	       0x105160ee8 pymain_run_file_obj + 220
13  Python                        	       0x105160638 pymain_run_file + 72
14  Python                        	       0x10515fec8 Py_RunMain + 872
15  Python                        	       0x1051612c4 Py_BytesMain + 40
16  dyld                          	       0x1ac4a3e50 start + 2544

Thread 1:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 2:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 3:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 4:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 5:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 6:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 7:
0   libsystem_kernel.dylib        	       0x1ac7925e4 __psynch_cvwait + 8
1   libsystem_pthread.dylib       	       0x1ac7ce638 _pthread_cond_wait + 1232
2   libopenblas64_.0.dylib        	       0x10a438ef8 blas_thread_server + 360
3   libsystem_pthread.dylib       	       0x1ac7ce06c _pthread_start + 148
4   libsystem_pthread.dylib       	       0x1ac7c8e2c thread_start + 8

Thread 8:
0   libsystem_pthread.dylib       	       0x1ac7c8e18 start_wqthread + 0

Thread 9:
0   libsystem_pthread.dylib       	       0x1ac7c8e18 start_wqthread + 0


Thread 0 crashed with ARM Thread State (64-bit):
    x0: 0x00006000034374c8   x1: 0x000000012b8172d0   x2: 0x0000000000000000   x3: 0x0000600003a245c0
    x4: 0x0000600001e30f00   x5: 0x0000000000000000   x6: 0x0000000000000800   x7: 0x000000000002e600
    x8: 0x0000000000000000   x9: 0xffffffffffffffff  x10: 0x0000000000000000  x11: 0x0000000000000002
   x12: 0x0000000000000002  x13: 0x0000000000000000  x14: 0x00000000888ee82e  x15: 0x00000000886ee00e
   x16: 0x00000001ac7c93a0  x17: 0x000000020ccddcd8  x18: 0x0000000000000000  x19: 0x000000011cf2f768
   x20: 0x000000011cf2f750  x21: 0x00006000034374c8  x22: 0x000000010980e400  x23: 0x0000000000000000
   x24: 0x0000000000000008  x25: 0x000000011cf2f7e8  x26: 0x000000000000001b  x27: 0x000000000000001a
   x28: 0x000000000000001a   fp: 0x000000016b272e90   lr: 0x000000012b812970
    sp: 0x000000016b272d00   pc: 0x000000012b81297c cpsr: 0x60001000
   far: 0x0000000000000010  esr: 0x92000006 (Data Abort) byte read Translation fault

Binary Images:
       0x12a7a4000 -        0x12bc9ffff libarrow.600.dylib (*) <89257bc7-1ebe-3b6f-adce-8a03ca75849d> /Users/USER/*/libarrow.600.dylib
       0x1ac68e000 -        0x1ac70eff3 libsystem_c.dylib (*) <a3869999-0792-3e09-b3fb-5e87ae4639be> /usr/lib/system/libsystem_c.dylib
       0x104f90000 -        0x105263fff org.python.python (3.10.8, (c) 2001-2021 Python Software Foundation.) <ee96e2f7-d454-3fdb-b251-2d5245854092> /opt/homebrew/*/Python.framework/Versions/3.10/Python
       0x1ac49e000 -        0x1ac5284bf dyld (*) <de46dd52-4994-3fd8-b4b4-e352a1a19354> /usr/lib/dyld
       0x1ac78e000 -        0x1ac7c6ffb libsystem_kernel.dylib (*) <6d6644d3-3db3-34c4-b1e3-c675ec5360f0> /usr/lib/system/libsystem_kernel.dylib
       0x1ac7c7000 -        0x1ac7d3ffb libsystem_pthread.dylib (*) <886caca0-5762-3640-8db2-3fa3b911c062> /usr/lib/system/libsystem_pthread.dylib
       0x10a2d0000 -        0x10b517fff libopenblas64_.0.dylib (*) <0672674f-0fbf-3245-8fec-358e42c77be2> /Users/USER/*/libopenblas64_.0.dylib
               0x0 - 0xffffffffffffffff ??? (*) <00000000-0000-0000-0000-000000000000> ???

External Modification Summary:
  Calls made by other processes targeting this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=965.8M resident=0K(0%) swapped_out_or_unallocated=965.8M(100%)
Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%)

                                VIRTUAL   REGION 
REGION TYPE                        SIZE    COUNT (non-coalesced) 
===========                     =======  ======= 
Activity Tracing                   256K        1 
Kernel Alloc Once                   32K        1 
MALLOC                           279.2M       48 
MALLOC guard page                   96K        5 
MALLOC_MEDIUM (reserved)         720.0M        6         reserved VM address space (unallocated)
MALLOC_NANO (reserved)           384.0M        1         reserved VM address space (unallocated)
STACK GUARD                        160K       10 
Stack                             20.8M       10 
VM_ALLOCATE                      196.0M      103 
VM_ALLOCATE (reserved)           160.0M        1         reserved VM address space (unallocated)
__AUTH                             308K       61 
__AUTH_CONST                      3554K      148 
__DATA                            5485K      295 
__DATA_CONST                      7575K      286 
__DATA_DIRTY                       361K       59 
__LINKEDIT                       785.9M      138 
__OBJC_CONST                       289K       36 
__OBJC_RO                         65.1M        1 
__OBJC_RW                         1981K        1 
__TEXT                           179.9M      293 
dyld private memory                256K        1 
mapped file                         64K        1 
shared memory                       64K        4 
===========                     =======  ======= 
TOTAL                              2.7G     1510 
TOTAL, minus reserved VM space     1.5G     1510 



-----------
Full Report
-----------

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Even with the crash log we need more information to understand what's going on, in particular: what steps are needed to reproduce the issue. As Ned mentions the Python builds in our own installers work just fine on macOS Ventura.

One thing I noticed is that there's a reference to libarrow in the crash dump, that's another think to check: is that library compatible with Ventura and do they have an update available.

[ronaldoussoren]

Update: The crash happens in a 3th-party library after a call to exit(3), which makes it likely that this is not a problem with CPython itself.

[EugeneTorap]

Hello @ronaldoussoren. I have installed the python 3.10.8 from the official site and all works good!
I will prepare the issue for Homebrew!

[EugeneTorap]

@ned-deily @ronaldoussoren Thank you so much for your help! I'll close the github issue

[georgelza]

not really closed, I'm having the same problem on multiple programs that worked under 3.9.x, once I upgraded to 3.10 or 3.11 and now ever downgraded to 3.9 program would start, as soon as i click on a tinter menu bar program crash with Segmentation fault: 11
this is on M1 mac, using the universal installer.