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cwl.load_workflow_json -> cwl.pwd_to_cwl #104

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Merged
merged 2 commits into from
May 15, 2025
Merged

cwl.load_workflow_json -> cwl.pwd_to_cwl #104

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00bc3c5
`cwl.load_workflow_json` -> `cwl.pwd_to_cwl`
GeigerJ2 May 15, 2025
fe67cd7
Rename to write_workflow
jan-janssen May 15, 2025
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4 changes: 2 additions & 2 deletions example_workflows/arithmetic/cwl.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,7 @@
{
"id": "92e3921b-2bb8-4333-8cfe-4bd27f785d24",
"cell_type": "code",
"source": "from python_workflow_definition.cwl import load_workflow_json",
"source": "from python_workflow_definition.cwl import write_workflow",
"metadata": {
"trusted": true
},
Expand All @@ -44,7 +44,7 @@
{
"id": "5303c059-8ae4-4557-858e-b4bd64eac711",
"cell_type": "code",
"source": "load_workflow_json(file_name=\"workflow.json\")",
"source": "write_workflow(file_name=\"workflow.json\")",
"metadata": {
"trusted": true
},
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4 changes: 2 additions & 2 deletions example_workflows/nfdi/cwl.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -54,7 +54,7 @@
{
"id": "92e3921b-2bb8-4333-8cfe-4bd27f785d24",
"cell_type": "code",
"source": "from python_workflow_definition.cwl import load_workflow_json",
"source": "from python_workflow_definition.cwl import write_workflow",
"metadata": {
"trusted": true
},
Expand Down Expand Up @@ -106,7 +106,7 @@
{
"id": "5303c059-8ae4-4557-858e-b4bd64eac711",
"cell_type": "code",
"source": "load_workflow_json(file_name=\"workflow.json\")",
"source": "write_workflow(file_name=\"workflow.json\")",
"metadata": {
"trusted": true
},
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4 changes: 2 additions & 2 deletions example_workflows/quantum_espresso/cwl.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -44,7 +44,7 @@
{
"id": "92e3921b-2bb8-4333-8cfe-4bd27f785d24",
"cell_type": "code",
"source": "from python_workflow_definition.cwl import load_workflow_json",
"source": "from python_workflow_definition.cwl import write_workflow",
"metadata": {
"trusted": true
},
Expand All @@ -54,7 +54,7 @@
{
"id": "5303c059-8ae4-4557-858e-b4bd64eac711",
"cell_type": "code",
"source": "load_workflow_json(file_name=\"workflow.json\")",
"source": "write_workflow(file_name=\"workflow.json\")",
"metadata": {
"trusted": true
},
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2 changes: 1 addition & 1 deletion python_workflow_definition/src/python_workflow_definition/cwl/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -231,7 +231,7 @@ def _write_workflow(workflow):
dump(workflow_template, f, Dumper=Dumper)


def load_workflow_json(file_name: str):
def write_workflow(file_name: str):
with open(file_name, "r") as f:
workflow = json.load(f)

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