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sparsehc: Memory-efficient hierarchical clustering Compile: From Eclipse: Add the whole downloaded project to workspace and build From Linux terminal: Go to the Release folder and type "make" The executable file is Release/sparsehc Command: ./sparsehc --matrix=<input_path> --tree=<output_path> --size=<number_of_data_points> --threshold=<distance_threshold> --linkage=<linkage_type> Parameters: --matrix=%s Path to the input matrix file <required> --tree=%s Path to the output tree file <required> --size=%u Number of data points <required> --dim=%u Dimension of each point <required> --threshold=%f The maximum distance value in the input distance matrix <required> --linkage=%s The linkage type: average, complete or single <required> Example: ./sparsehc --matrix=/Data/sparse_matrix.dat --tree=/Data/average_tree.txt --size=100 --threshold=0.5 --linkage=average Data: To randomly generate pairwise Euclidean distance matrices of different sizes and dimensions: https://bitbucket.org/ngthuydiem/simmat
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Online hierarchical clustering, "forked" from BitBucket. Modifying it so that it compiles.
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