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To my knowledge, this appears to fix the outstanding issue. Validation of the two required fields is handled by bootstrap and jinja2. Unselected pulldowns will now display a default tool-tip bubble.

@charles-cowart charles-cowart mentioned this pull request Apr 17, 2023
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@antgonza antgonza left a comment

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I think this basically fixes/allows for pandas 2.0, right? To test, would you mind changing to dev (vs. master) to see if the tests pass ?

INSTALL.md Outdated
@@ -20,7 +20,7 @@ Setup a virtual environment in conda named `qiita` by executing the following:

```bash
conda config --add channels conda-forge
conda create -q --yes -n qiita python=3.6 pip libgfortran numpy nginx
conda create -q --yes -n qiita python=3.9 pip libgfortran numpy nginx cython redis
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Does this really need to change?

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@@ -1102,12 +1102,14 @@ def _build_mapping_file(self, samples, rename_dup_samples=False,
if si not in sample_infos:
si_df = si.to_dataframe()
if categories is not None:
si_df = si_df[set(categories) & set(si_df.columns)]
si_df = si_df[list(set(categories) &
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I think these changes are needed for pandas > 2.0, no?

@charles-cowart charles-cowart changed the base branch from master to dev May 23, 2023 17:13
@antgonza antgonza merged commit 87c2e51 into qiita-spots:dev May 31, 2023
@charles-cowart charles-cowart deleted the fix_3219v2 branch May 31, 2023 22:21
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2 participants