The aim of this macro is to allow users to register multiplex images (CZI extension) using the first DAPI channel as a reference.
To install, drop the file in Fiji.app>macros>toolsets folder. Restart Fiji and the macro name will then appear under the >> menu on the right hand side of Fiji bar.
This macro requires HyperStackReg (developped by Ved P. Sharma (https://github.com/ved-sharma/HyperStackReg)). Please remember to cite the authors
This plugin has been turned into a macro toolsets from version 0.1.1. To install, find your Fiji.app folder and drag and drop this macro inside macros>toolsets folder. Once done, the macro should appear on the >> in Fiji main window, on the right-hand side. A single button should appear on the Fiji main window to run the macro.
Please cite HyperStackReg if you use this macro.
(0.1.1) Transform macro into toolsets
(0.1.2) Reorder dimensions