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covar: shrinkage covariance estimation

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This Python package contains a single function, cov_shrink which implements a plug-in shrinkage estimator for the covariance matrix.

The estimator is described by Schafer and Strimmer (2005), where it is called "Target D: (diagonal, unequal variance)".

See the documentation for more details.

Installation

pip install covar

Dependencies

  1. Python (2.7, or 3.3+)
  2. numpy
  3. scipy (0.16+)
  4. cython

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Compute shrinkage estimates of the covariance matrix

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