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@nextstrain

Popular repositories

  1. FitnessInference

    Prediction fitness of leaves on a genealogical tree

    Python 3 2

  2. augur

    Flu divination

    Python 1

  3. betatree

    Generate and analyze beta coalescent trees

    Python 3

  4. auspice

    Flu visualization

    JavaScript

  5. nextflu

    Forked from blab/nextflu

    Real-time tracking of influenza evolution

    Python

  6. nextflu2

    CSS

537 contributions in the last year

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Contribution activity

August 2018

Created a pull request in nextstrain/auspice that received 11 comments

this fixes (papers over) issue #547.

The issue was missing coordinates which result in missing transmissions from the index, which later results in 'type undefined' errors. This PR jus…

+30 −14 11 comments

Created an issue in nextstrain/auspice that received 3 comments

Sequence for non-variable sites

I think we should have sequence info for sites that are not variable. The current behavior is not good: https://nextstrain.org/zika?c=gt-NS1_347 Sa…

3 comments

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