pkgs/sagemath-homfly, build/pkgs/sagemath_homfly: New

build/pkgs/sagemath_homfly/SPKG.rst

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+src/README.rst

build/pkgs/sagemath_homfly/bootstrap

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+../sagelib/bootstrap

build/pkgs/sagemath_homfly/dependencies

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+$(PYTHON) sagelib libhomfly | $(PYTHON_TOOLCHAIN) sage_setup cython pkgconfig

build/pkgs/sagemath_homfly/distros/conda.txt

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+sagemath-homfly

build/pkgs/sagemath_homfly/install-requires.txt

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+# This file is updated on every release by the sage-update-version script
+sagemath-homfly

build/pkgs/sagemath_homfly/package-version.txt

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+src/VERSION.txt

build/pkgs/sagemath_homfly/spkg-install

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+#!/usr/bin/env bash
+# From sage-spkg.
+# For type=script packages, the build rule in build/make/Makefile sources
+# sage-env but not sage-dist-helpers.
+lib="$SAGE_ROOT/build/bin/sage-dist-helpers"
+source "$lib"
+if [ $? -ne 0 ]; then
+    echo >&2 "Error: failed to source $lib"
+    echo >&2 "Is $SAGE_ROOT the correct SAGE_ROOT?"
+    exit 1
+fi
+cd src
+
+export PIP_NO_INDEX=true
+export PIP_FIND_LINKS="file://$SAGE_SPKG_WHEELS"
+
+if [ "$SAGE_EDITABLE" = yes ]; then
+    # SAGE_ROOT/src/setup.py installs everything, nothing to do...
+    if [ "$SAGE_WHEELS" = yes ]; then
+        # ... except we build the wheel if requested
+        sdh_setup_bdist_wheel && sdh_store_wheel .
+    fi
+else
+    if [ "$SAGE_WHEELS" = yes ]; then
+        # Modularized install via wheels
+        sdh_pip_install .
+    # else nothing to do in legacy direct installation.
+    fi
+fi

build/pkgs/sagemath_homfly/spkg-src

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+#!/usr/bin/env bash
+#
+# Script to prepare an sdist tarball for sagemath-homfly
+# This script is not used during build.
+#
+# HOW TO MAKE THE TARBALL:
+# ./sage --sh build/pkgs/sagemath_homfly/spkg-src
+
+if [ -z "$SAGE_ROOT" ] ; then
+    echo >&2 "Error - SAGE_ROOT undefined ... exiting"
+    echo >&2 "Maybe run 'sage -sh'?"
+    exit 1
+fi
+
+# Exit on failure
+set -e
+
+cd build/pkgs/sagemath_homfly
+
+cd src
+python3 -u setup.py --no-user-cfg sdist --dist-dir "$SAGE_DISTFILES"

build/pkgs/sagemath_homfly/src

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+../../../pkgs/sagemath-homfly

build/pkgs/sagemath_homfly/type

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+optional

pkgs/sagemath-homfly/MANIFEST.in

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+global-exclude *.c
+global-exclude *.cpp
+
+global-exclude __pycache__
+global-exclude *.py[co]
+global-exclude *.bak
+global-exclude *.so
+global-exclude *~
+prune .tox
+prune build
+prune dist

pkgs/sagemath-homfly/README.rst

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+==============================================================================
+ Sage: Open Source Mathematics Software: Graph (iso/auto)morphisms with homfly
+==============================================================================
+
+About SageMath
+--------------
+
+   "Creating a Viable Open Source Alternative to
+    Magma, Maple, Mathematica, and MATLAB"
+
+   Copyright (C) 2005-2022 The Sage Development Team
+
+   https://www.sagemath.org
+
+SageMath fully supports all major Linux distributions, recent versions of
+macOS, and Windows (using Cygwin or Windows Subsystem for Linux).
+
+The traditional and recommended way to install SageMath is from source via
+Sage-the-distribution (https://www.sagemath.org/download-source.html).
+Sage-the-distribution first builds a large number of open source packages from
+source (unless it finds suitable versions installed in the system) and then
+installs the Sage Library (sagelib, implemented in Python and Cython).
+
+
+About this pip-installable source distribution
+----------------------------------------------
+
+This pip-installable source distribution ``sagemath-homfly`` is a small
+optional distribution for use with ``sagemath-standard``.
+
+It provides a Cython interface to the ``homfly`` library for the purpose
+of computing graph (iso/auto)morphisms.

pkgs/sagemath-homfly/VERSION.txt

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+9.8.beta1

pkgs/sagemath-homfly/pyproject.toml.m4

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+[build-system]
+# Minimum requirements for the build system to execute.
+requires = [
+    esyscmd(`sage-get-system-packages install-requires-toml \
+        setuptools     \
+        wheel          \
+        sage_setup     \
+        sagemath_environment \
+        sagemath_standard \
+        cython         \
+        gmpy2          \
+        cysignals      \
+                    ')]
+build-backend = "setuptools.build_meta"

pkgs/sagemath-homfly/requirements.txt.m4

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+Cython==esyscmd(`printf $(sed "s/[.]p.*//;" ../cython/package-version.txt)')
+sagemath-standard==esyscmd(`printf $(sed "s/[.]p.*//;" ../sagelib/package-version.txt)')

pkgs/sagemath-homfly/sage

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+../../src/sage

pkgs/sagemath-homfly/setup.cfg.m4

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+# -*- conf-unix -*-
+[metadata]
+name = sagemath-homfly
+version = file: VERSION.txt
+description = Sage: Open Source Mathematics Software: Graph (iso/auto)morphisms with homfly
+long_description = file: README.rst
+long_description_content_type = text/x-rst
+license = GNU General Public License (GPL) v2 or later
+author = The Sage Developers
+author_email = sage-support@googlegroups.com
+url = https://www.sagemath.org
+
+classifiers =
+    Development Status :: 6 - Mature
+    Intended Audience :: Education
+    Intended Audience :: Science/Research
+    License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
+    Operating System :: POSIX
+    Operating System :: MacOS :: MacOS X
+    Programming Language :: Python :: 3 :: Only
+    Programming Language :: Python :: 3.8
+    Programming Language :: Python :: 3.9
+    Programming Language :: Python :: 3.10
+    Programming Language :: Python :: 3.11
+    Programming Language :: Python :: Implementation :: CPython
+    Topic :: Scientific/Engineering :: Mathematics
+
+[options]
+python_requires = >=3.8, <3.12
+install_requires =
+    esyscmd(`sage-get-system-packages install-requires \
+        sagelib \
+        | sed "2,\$s/^/    /;"')dnl

pkgs/sagemath-homfly/setup.py

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+#!/usr/bin/env python
+
+from distutils import log
+from setuptools import setup
+
+# Work around a Cython problem in Python 3.8.x on macOS
+# https://github.com/cython/cython/issues/3262
+import os
+if os.uname().sysname == 'Darwin':
+    import multiprocessing
+    multiprocessing.set_start_method('fork', force=True)
+
+# If build isolation is not in use and setuptools_scm is installed,
+# then its file_finders entry point is invoked, which we don't need.
+# Workaround from ​https://github.com/pypa/setuptools_scm/issues/190#issuecomment-351181286
+try:
+    import setuptools_scm.integration
+    setuptools_scm.integration.find_files = lambda _: []
+except ImportError:
+    pass
+
+# PEP 517 builds do not have . in sys.path
+import sys
+sys.path.insert(0, os.path.dirname(__file__))
+
+if len(sys.argv) > 1 and (sys.argv[1] == "sdist" or sys.argv[1] == "egg_info"):
+    sdist = True
+else:
+    sdist = False
+
+if sdist:
+    cmdclass = {}
+else:
+    from sage_setup.excepthook import excepthook
+    sys.excepthook = excepthook
+
+    from sage_setup.setenv import setenv
+    setenv()
+
+    import sage.env
+    sage.env.default_required_modules = sage.env.default_optional_modules = ()
+
+    from sage_setup.command.sage_build_cython import sage_build_cython
+    from sage_setup.command.sage_build_ext import sage_build_ext
+    sage_build_cython.built_distributions = ['sagemath-homfly']
+
+    cmdclass = dict(build_cython=sage_build_cython,
+                    build_ext=sage_build_ext)
+
+if sdist:
+    python_packages = []
+    python_modules = []
+    cython_modules = []
+else:
+    from sage_setup.find import find_python_sources
+    python_packages, python_modules, cython_modules = find_python_sources(
+        '.', ['sage'], distributions=['sagemath-homfly'])
+
+    log.warn('python_packages = {0}'.format(python_packages))
+    log.warn('python_modules = {0}'.format(python_modules))
+    log.warn('cython_modules = {0}'.format(cython_modules))
+
+setup(
+    cmdclass = cmdclass,
+    packages = python_packages,
+    py_modules  = python_modules,
+    ext_modules = cython_modules,
+)