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EdgeReadIterator (used in Picard's CollectWgsMetrics) doesn't handle intervals correctly #1615

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michaelgatzen opened this issue Jun 27, 2022 · 2 comments
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EdgeReadIterator (used in Picard's CollectWgsMetrics) doesn't handle intervals correctly #1615

michaelgatzen opened this issue Jun 27, 2022 · 2 comments
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@michaelgatzen
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When running Picard's CollectWgsMetrics with an IntervalList, only the start and end coordinates of the first interval in that list are considered. This can be traced back to a bug in EdgeReadIterator and AbstractLocusInfo.
@michaelgatzen
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I can't assign this to myself because I'm not a contributor, but I'm working on this issue.

@michaelgatzen michaelgatzen mentioned this issue Jun 30, 2022
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@lbergelson
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closed by #1616

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