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Return ValueError for mismatched samples, UserWarning for missing dat… #401

Return ValueError for mismatched samples, UserWarning for missing dat…

Return ValueError for mismatched samples, UserWarning for missing dat… #401

Workflow file for this run

name: Test and publish to PyPI
on:
push:
branches:
- main
- development
tags: [ 'v*.*.*' ]
pull_request:
branches:
- main
- development
release:
types: [ created ]
jobs:
test:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
steps:
- uses: actions/checkout@v2
- name: 'Set up Python ${{matrix.python-version}}'
uses: actions/setup-python@v2
with:
python-version: ${{matrix.python-version}}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
- name: Install my package
run: |
python -m pip install .
- name: Install test dependencies
run: |
pip install flake8 pytest coverage
- name: Test with pytest
run: |
coverage run -m pytest --cache-clear
- name: Clean up coverage data
run: |
# This is a workaround for the fact that the `[coverage:paths]` section
# of `setup.cfg` is not actually applies until we run `combine`; so we
# rename the report such that we can then "combine" it.
mv .coverage .coverage.hack
coverage combine
coverage report
- uses: codecov/codecov-action@v1
deploy:
needs: test
runs-on: ubuntu-latest
name: deploy
steps:
- uses: actions/checkout@v2
- name: Set up Python '3.9'
uses: actions/setup-python@v2
with:
python-version: '3.9'
- name: "Install"
run: |
python -m pip install --upgrade pip;
python -m pip install build
pip install setuptools wheel twine
python -m build
# python setup.py sdist bdist_wheel
- uses: actions/upload-artifact@v2
with:
name: dist
path: dist
- name: Publish to PyPI (on tag)
if: startsWith(github.ref, 'refs/tags/v')
uses: pypa/gh-action-pypi-publish@release/v1
with:
user: __token__
password: ${{ secrets.pypi_token }}