scientificcomputing · jorgensd · Nov 30, 2022 · Nov 30, 2022 · Nov 30, 2022 · Nov 30, 2022
diff --git a/_toc.yml b/_toc.yml
@@ -2,19 +2,6 @@ format: jb-book
 root: index
 
 parts:
-  - caption: Python packaging
-    chapters:
-    - file: "docs/part1/packaging"
-    - file: "docs/part1/testing"
-    - file: "docs/part1/coverage"
-    - file: "docs/part1/linting"
-    - file: "docs/part1/pre_commit.md"
-
-  - caption: Github tools
-    chapters:
-    - file: "docs/part2/github"
-    - file: "docs/part2/citable"
-    - file: "docs/part2/issues"
 
   - caption: Documentation
     chapters:

diff --git a/docs/part1/coverage.md b/docs/part1/coverage.md
diff --git a/docs/part1/linting.md b/docs/part1/linting.md
diff --git a/docs/part1/packaging.md b/docs/part1/packaging.md
diff --git a/docs/part1/pre_commit.md b/docs/part1/pre_commit.md
diff --git a/docs/part1/testing.md b/docs/part1/testing.md
diff --git a/docs/part2/citable.md b/docs/part2/citable.md
diff --git a/docs/part2/github.md b/docs/part2/github.md
diff --git a/docs/part2/issues.md b/docs/part2/issues.md
diff --git a/docs/part3/publishing_book.md b/docs/part3/publishing_book.md
@@ -1,7 +1,6 @@
 # Publishing a Jupyter-book as a webpage
 
-To make it simple to integrate the Jupyter-book with Github, we using Github Pages, as described in
-[Publishing to Github Pages](publishing-to-pages).
+To make it simple to integrate the Jupyter-book with Github, we using Github Pages, as described in [Publishing to Github Pages](https://scientificcomputing.github.io/gh-workflows.html#publishing-to-pages).
 
 ## Official Github Actions
 Follow the steps in [Publishing with a Github Custom Actions workflow](https://docs.github.com/en/pages/getting-started-with-github-pages/configuring-a-publishing-source-for-your-github-pages-site#publishing-with-a-custom-github-actions-workflow)

diff --git a/docs/part4/docker.md b/docs/part4/docker.md
@@ -8,4 +8,4 @@ See [Publishing to Github Packages](https://docs.github.com/en/actions/publishin
 You can choose if the image is public or private, see [Access control](https://docs.github.com/en/packages/learn-github-packages/configuring-a-packages-access-control-and-visibility) for more information.
 
 ## DockerHub
-There are [Github workflows](../part2/github.md) for [publishing to DockerHub](https://docs.github.com/en/actions/publishing-packages/publishing-docker-images#publishing-images-to-docker-hub).
+There are [Github workflows](https://scientificcomputing.github.io/gh-workflows.html#workflows) for [publishing to DockerHub](https://docs.github.com/en/actions/publishing-packages/publishing-docker-images#publishing-images-to-docker-hub).
diff --git a/pyproject.toml b/pyproject.toml
@@ -33,6 +33,7 @@ test = [
 docs = [
     "jupyter-book", # Required to build documentation
     "jupytext", # Required to convert .py to .ipynb files
+    "ipython!=8.7.0" # https://github.com/ipython/ipython/issues/13845
 ]
 
 binder = [ # Required to interface with Binder when having a Dockerfile in root