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- # ATAC-seq
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+ # Custom Data Loaders
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``` {toctree}
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:maxdepth: 1
@@ -7,32 +7,31 @@ notebooks/custom_dl/tiledb
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notebooks/custom_dl/lamin
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notebooks/custom_dl/ann_collection
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notebooks/custom_dl/Tahoe100_mrVI_lamin
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-
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```
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``` {customcard}
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- :path: notebooks/use_cases/ custom_dl/tiledb
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+ :path: notebooks/custom_dl/tiledb
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:tags: Analysis, Custom-Dataloaders, Integration, Dev
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Learn a scalable approach using TileDBDataModule dataloader to training an scVI model on Census data.
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```
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``` {customcard}
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- :path: notebooks/use_cases/ custom_dl/lamin
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+ :path: notebooks/custom_dl/lamin
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:tags: Analysis, Custom-Dataloaders, Integration, Dev
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Use the Lamin MappedCollectionDataModule for a scalable approach to training an scVI model on multiple adata's.
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```
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``` {customcard}
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- :path: notebooks/use_cases/ custom_dl/ann_collection
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+ :path: notebooks/custom_dl/ann_collection
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:tags: Analysis, Custom-Dataloaders, Integration, Dev
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Use the AnnCollection dataloader for a scalable approach to training an scVI model on multiple adata's.
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```
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``` {customcard}
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- :path: notebooks/use_cases/ custom_dl/Tahoe100_mrVI_lamin
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+ :path: notebooks/custom_dl/Tahoe100_mrVI_lamin
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:tags: Analysis, Custom-Dataloaders, Integration, Dev
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Use the Lamin Custom Dataloader to train mrVI torch model over Tahoe100M cells dataset
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