pyantarctica python package for the ACE-DATA and ASAID projects

ASAID / ACE-DATA: Data science for the antarctic

Usage

import pyantarctica
import pyantarctica.dataset as data
import pyantarctica.modeling as mod
import pyantarctica.visualizing as viz

Every notebook in the ACE-DATA data science project repository provides relatively simple (hopefully) and straightforward examples and scripts to run steps in the ASAID project analysis pipeline.

See e.g. data preparation scrips PROJ_XX_DataPreparation.ipynb where XX is the subproject number.

Setup

If you are using conda, first set up a conda environment:

(or pipenv works nicely as well)

$ conda create --name ace-data python=3
$ conda activate ace-data

To install the pyanctarctica package, run (base 0.1.0 is on PyPI)

From source:

$ cd YOUR_PROJECT_FOLDER
$ mkdir src && cd src
$ git clone ./src
$ pip install src

From the gitlab repo gitlab.datascience.ch/ACE-ASAID/pyanctarctica.git:

$ pip install -e git+git@gitlab.datascience.ch:ACE-ASAID/pyantarctica.git

From the PyPI repos:

$ pip install pyantarctica

Documentation

Read the documentation here!

Release process

1. Update version in setup.py, commit and tag.
2. Run rm -rf dist && python setup.py sdist bdist_wheel && twine upload dist/*
3. Change the bump of the version to development (X.Y.Z+1.devYYYYMMDD)

Compatibility

Python 3 preferred, but not required.

License

Copyright 2017-2018 - Swiss Data Science Center (SDSC)

A partnership between École Polytechnique Fédérale de Lausanne (EPFL) and Eidgenössische Technische Hochschule Zürich (ETHZ).

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at:

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Authors

• Michele Volpi, SDSC, michele.volpi@sdsc.ethz.ch
• Sebastian Landwehr, PSI, sebastian.landwehr@psi.ch

Requirements

(Does not include sub-package dependencies)

pyantarctica
~~Cartopy==0.16.0~~
~~GPy==1.9.2~~
matplotlib==2.2.2
numpy==1.14.5
pandas==0.23.0
papermill==0.12.6
pickleshare==0.7.4
scikit-learn==0.19.1
scipy==1.1.0