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  • University of Queensland
  • UQ, St Lucia, Australia

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@Mitter-lab

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  1. scramAligner scramAligner Public

    The scramAligner pipeline is designer to align small RNA reads to references sequences with no mis-matches. There is no requirement for reference index building. The pipeline is ideally suited to a…

    Python

  2. scram2plot scram2plot Public

    Python scripts for plotting scram2 alignments

    Python

  3. scramTrimmer scramTrimmer Public

    Small RNA read adaptor trimmer - fast, trims NEXTflex reads in one step, compressed FASTQ input and output

    Go

  4. siRNAenricher siRNAenricher Public

    Identify genomic regions with siRNA enrichment

    Python

  5. data_tutorials data_tutorials Public

    iPython notebooks for workshops

    Jupyter Notebook