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Test on VCF/BCF indexes not produced by htslib #60

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jeromekelleher opened this issue Mar 3, 2024 · 0 comments
Open

Test on VCF/BCF indexes not produced by htslib #60

jeromekelleher opened this issue Mar 3, 2024 · 0 comments

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@jeromekelleher
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It's not clear how much we're depending on properties of the indexes produced by htslib. I think everything in the test suite has been produced by bcftools index or tabix, so it would be good to check if we get the same results using indexes generated by htsjdk e.g.
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@jeromekelleher