Spring Boot runner with top-level package duplicate does not work

[sukrit007]

Given:
A Spring boot application integrated with Jersey 2.7, Jerse-Spring3 (2.7)
https://github.com/sukrit007/springboot-jersey

And:
An empty/non-empty folder, "com" in resources folder.

When:
I run Spring boot application

mvn spring-boot:run

Then:
My application fails with error:

[WARNING] 
java.lang.ClassNotFoundException: com.geowarin.Application
    at java.net.URLClassLoader$1.run(URLClassLoader.java:372)
    at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
    at java.security.AccessController.doPrivileged(Native Method)
    at java.net.URLClassLoader.findClass(URLClassLoader.java:360)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
    at org.springframework.boot.maven.RunMojo$LaunchRunner.run(RunMojo.java:304)
    at java.lang.Thread.run(Thread.java:744)

When:
I remove the folder com and run the application again.

Then:
My application starts working.

[dsyer]

This is nothing to do with Jersey, but it does looks like a bug in the Maven plugin. Workarounds: if you build a jar file it will be executable, and you can run your main method from the IDE. Also "mvn exec:java" works for me (but doesn't have some of the other benefits of the Boot plugin). And "mvn spring-boot:run -Drun.addResources=false" also works.

[dsyer]

There's a fix at http://github.com/dsyer/spring-boot. I'll pull it over here once we have 1.0.0 generally available.