Open
Description
Hi,
First - thanks to all developers for creating such a useful plotting package.
I have come across a bug in mcmc_areas_ridges recently, which means that the density plots created in mcmc_areas_ridges don't overlay properly when used in conjunction with scale_y_discrete.
I think this worked in the past, since I was reusing code from an earlier project which didn't have this problem - although I can't be sure.
Here is what the plot looks like without using scale_y_discrete
And here is the same plot, using scale_y_discrete to reorder the categories in the y axis
here is a working example:
library(bayesplot)
n = 100
posterior =
data.frame(x = rnorm(n),
y = rnorm(n),
z = rnorm(n),
a = rnorm(n))
# Overlay works properly
mcmc_areas_ridges(posterior, prob = 0.89,
pars = c("x", "y", "z"))
# Use scale_y_discrete to reorder y axis means overlapping fails
mcmc_areas_ridges(posterior, prob = 0.89,
pars = c("x", "y", "z")) +
scale_y_discrete(labels = c("z", "y", "x"))
# Don't reorder, but still use scale_y_discrete - overlapping fails
mcmc_areas_ridges(posterior, prob = 0.89,
pars = c("x", "y", "z")) +
scale_y_discrete(labels = c("x", "y", "z"))
# final test that should do nothing
mcmc_areas_ridges(posterior, prob = 0.89) +
scale_y_discrete(labels = c("z", "y", "x", "a"))