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@thepanlab

the PAN lab

The Parallel computing, Artificial intelligence, and Network science (PAN) Lab in the School of Computer Science and the Dept. of Microbiology and Plant Biology

Popular repositories

  1. Seq2MAG Seq2MAG Public

    Metagenomics workflow from sequencing data to Metagenome-Assembled Genomes (MAGs)

    Python 7 2

  2. Sipros4 Sipros4 Public

    Sipros for stable isotopic mass spectrum meta proteomic

    C 7 1

  3. Supercomputing_Instructions Supercomputing_Instructions Public

    Useful information to use the supercomputers

    Shell 3 4

  4. LINA LINA Public

    Jupyter Notebook 3

  5. GattacaNet2 GattacaNet2 Public

    Jupyter Notebook 1 1

  6. Aerith Aerith Public

    R package for isotopic mass spectra data

    C++ 1

Repositories

Showing 10 of 23 repositories
  • smoking_cessation_intervention_messages Public

    Scripts for paper "Towards AI-Driven Healthcare: Systematic Optimization, Linguistic Analysis, and Clinicians’ Evaluation of Large Language Models for Smoking Cessation Interventions"

    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 20, 2024
  • WetlandSoil Public

    Stoichiometric model and scripts used in wetland soil project

    MATLAB 0 0 0 0 Updated Dec 30, 2023
  • Supercomputing_Instructions Public

    Useful information to use the supercomputers

    Shell 3 4 0 0 Updated Dec 13, 2023
  • Jupyter Notebook 1 MIT 1 0 0 Updated Sep 21, 2023
  • Endoscopic_OCT_Epidural Public

    Code used for the paper "Epidural anesthesia needle guidance by forward-view endoscopic optical coherence tomography and deep learning""

    Jupyter Notebook 0 MIT 1 0 0 Updated Aug 22, 2023
  • PDN_Autograder Public Forked from parkerbrandt/PDN_Autograder

    The autograder for Projects 1 through 5 for the CS PDN course taught by Dr. Pan

    Python 0 1 0 0 Updated Aug 6, 2023
  • Sipros4 Public

    Sipros for stable isotopic mass spectrum meta proteomic

    C 7 MIT 1 0 0 Updated Jul 25, 2023
  • timecourseBiomarker Public

    This is the code repository for the GLMM analysis of metabolomic biomarker discovery in the paper “Persistent Biofluid Small Molecule Alterations Induced by Trypanosoma Cruzi Infection Are Not Restored by Antiparasitic Treatment.”

    0 0 0 0 Updated May 26, 2023
  • LINA Public
    Jupyter Notebook 3 MIT 0 0 0 Updated May 9, 2023
  • Aerith Public

    R package for isotopic mass spectra data

    C++ 1 0 0 0 Updated Apr 24, 2023

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