Tutorials

Thibaut Jombart edited this page Feb 6, 2018 · 4 revisions

These are the lastest tutorials for adegenet:

  • basics: data handling, basic population genetics, multivariate analysis, IBD, Monmonier
  • dapc: introduction to the Discriminant Analysis of Principal Components
  • spca: introduction to the spatial Principal Component Analysis
  • genomics: introduction to the genlight class for large SNP dataset, DAPC, large SNP data simulations
  • strata: introduction to the use of hierarchical clusters with genind and genlight objects.
  • snapclust: introduction to snapclust, a fast maximum-likelihood genetic clustering method.