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Jun 17, 2024 - Python
alternative-splicing
Here are 30 public repositories matching this topic...
Docker to run SUPPA for splicing quantification and analysis
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Jul 18, 2017 - Python
This study is using scRNA-seq to study the expression and regulation of alternative splicing (AS) events in single cells
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Feb 15, 2024 - Python
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Apr 14, 2021 - Python
Docker to run MISO for splicing quantification and analysis
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Jul 18, 2017 - Python
My personal snakemake pipeline for VAST-TOOLS execution
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Sep 4, 2020 - Python
Repository for method to analyse the relationship between germline variants and somatic mutations and alternative splicing in breast cancer patients based on RNA-Seq data,
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Jul 25, 2024 - Python
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
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May 4, 2022 - Python
Reading Genomic Files and provide data as API
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Feb 9, 2017 - Python
Algorithm to infer clusters of isoorthologous transcripts using gene-level homology relationships and a Reciprocal Best Hits approach
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Feb 18, 2024 - Python
Depository for Bioinformatics Master Project HT2022-VT2023
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Apr 18, 2023 - Python
Dynamic Isoform spliCing Estimator via sequencing data
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Jun 9, 2020 - Python
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Nov 2, 2021 - Python
Performing Cancer Diagnosis via an Isoform Level Expression Ranking-based LSTM Model
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Nov 4, 2019 - Python
Computational biology pipeline that quantifies RNA splicing and performs sQTL mapping
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Apr 29, 2018 - Python
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
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Jun 14, 2022 - Python
A supervised methodology for analyzing dysregulation in splicing machinery: an application in cancer diagnosis.
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Oct 17, 2019 - Python
A snakemake workflow to perform Alternative Splicing analysis from RNA-Seq with SUPPA2.
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Jul 3, 2020 - Python
Docker to run rMATS for splicing quantification and analysis
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Mar 21, 2019 - Python
SimSpliceEvol: Alternative splicing-aware simulation of biological sequence evolution
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Jun 21, 2024 - Python
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