Reading Genomic Files and provide data as API
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Updated
Feb 9, 2017 - Python
Reading Genomic Files and provide data as API
Docker to run SUPPA for splicing quantification and analysis
Docker to run MISO for splicing quantification and analysis
Computational biology pipeline that quantifies RNA splicing and performs sQTL mapping
Docker to run rMATS for splicing quantification and analysis
⚔️Find splicing-led, functional changes of the proteome.
A supervised methodology for analyzing dysregulation in splicing machinery: an application in cancer diagnosis.
Performing Cancer Diagnosis via an Isoform Level Expression Ranking-based LSTM Model
Dynamic Isoform spliCing Estimator via sequencing data
A snakemake workflow to perform Alternative Splicing analysis from RNA-Seq with SUPPA2.
My personal snakemake pipeline for VAST-TOOLS execution
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)
A tool to model the evolution and structural impact of alternative splicing
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
ISOform-guided prediction of epiTOPEs in cancer
Depository for Bioinformatics Master Project HT2022-VT2023
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