An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences
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Updated
Aug 8, 2022 - R
An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences
Bioinformatics pipeline for nanopore sequencing data
R package to perform data pre-processing for more informative bacterial GWAS
PhyloTrace is a GUI platform for a fully controllable cgMLST analysis workflow.
Functions for working with NCBI's Pathogen Detection data
A companion application for analyzing and viewing BTyper output files in aggregate
Data and analysis for the DciA evolution manuscript | StallingsLab & JRaviLab
Accompanying information to a scientific publication on the assembly of bacterial genomes using Illumina and nanopore sequencing data using Unicylcer.
string search for the direct detection of the insertion elements and clipping them off
Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.
R approach to analyze evolutionary phylogenomics
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