biosynthetic-gene-clusters toolkit
-
Updated
Nov 2, 2021 - Python
biosynthetic-gene-clusters toolkit
Methods and classes to support Biosynthetic Gene Cluster analysis
Repository for data, code & figures related to the publication: "Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic"
GEne Cluster prediction with COnditional random fields.
codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, phage, etc.) relative to the full genome.
lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
lsaBGC - suite for pan-BGC-omics analysis
Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)
A Graphical User Interface to Access and Output Protein Data
Add a description, image, and links to the biosynthetic-gene-clusters topic page so that developers can more easily learn about it.
To associate your repository with the biosynthetic-gene-clusters topic, visit your repo's landing page and select "manage topics."